Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01999 ATGAAGTCGAGGTTCTCACGGATCTGTGTCTTCTGCGGCACCAGCAATGGCAAGAACCCTAGCTACCAACTCGCTGCTATCCAACTCGGCAAACAGCTTGTGGAGAGGAGCATCGACTTGGTGTATGGAGGAGGGAGCATTGGGTTGATGGGGCAGATCTCACAAGTGGTATTTGATGGTGGACGCCACGTGTTAGGGGTCATTCCTACCACTCTGATGCCACCAGAGATAACGGGGGAGACGGTGGGAGAAGTGAGAGCAGTGTCGGGGATGCACCAACGAAAGGCAGAAATGGTTCGACAAGCTGACGCGTTCATTGCTCTCCCAGGTGGATATGGCACTCTGGAAGAATTACTTGAAGTCATTACTTGGGCTCAACTAGGAATCCACGACAAACCCGTGGGATTGTTGAACGTGGATGGCTACTACAACTCATTGCTGTCATTCATGGACAATGCTGTGGATGAAAGTTTCATTACACCAGCTGCCCGTCACATTATTGTGTCTGCCCAAACTGCCCAAGACCTTATGTCCAAACTTGAGGAATATGCCCCGAAGCACTGTGGCGTGGCACCAAAGCAGAGTTGGGAGATGAACCAAGAGTTATAA 609 0.5074 MKSRFSRICVFCGTSNGKNPSYQLAAIQLGKQLVERSIDLVYGGGSIGLMGQISQVVFDGGRHVLGVIPTTLMPPEITGETVGEVRAVSGMHQRKAEMVRQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFMDNAVDESFITPAARHIIVSAQTAQDLMSKLEEYAPKHCGVAPKQSWEMNQEL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01999 202 NCBIfam Rossman fold protein, TIGR00730 family 8 183 IPR005269 GO:0009691|GO:0016787
Spst8g01999 202 SUPERFAMILY MCP/YpsA-like 4 183 - -
Spst8g01999 202 Gene3D - 1 182 - -
Spst8g01999 202 FunFam CASP-like protein 1 182 - -
Spst8g01999 202 Pfam Possible lysine decarboxylase 50 179 IPR031100 -
Spst8g01999 202 PANTHER LOG FAMILY PROTEIN YJL055W 2 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01999 Spst-Chr8 27423080 27429308 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01999 8 27423080 27429308 Spst8g01999 8 27423080 27429308 ECH
Spst8g01999 8 27423080 27429308 Spst9g00295 9 2770077 2772207 PCT