Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01996 ATGTCTGATCCTGTCACTCATATTTCTTGCCCAAGAATAGGTCCCATATCTTTGCAGTGGACATCCCTTGTACCTTCGTCAGTGTCAGGCATAGAAGGATCTAACATTGATTCAAGCTTGTATACTGGTGCTCTGTTTTGGCCAAGAGAAGAAGTCACATGTTTTAAGCATGTATGTGCCACACCTAAGATTAAGTTGTATATTCCCTTGAATAAGCTTCCTTCAATTGTTGAATCCGACCTTCCTTCTCCATTGACTTGGCCTTGGCTCGTCTTGAAATACACTGAAGGCCTTTGCTGGGTGATGCACTACTATTATGAAGGTGTTTGTTCTTGGAATTGGTTTTATCCATATCACTATGCCCCCTTTGCCTCTGATCTCAAGGGCCTTGGTGAACTTGATATTAGCTTTAAGCTGGGAACCCCATTCAAACCATTTGACCAGCTTCTAGGGGTCTTTCCTGCTGCAAGCTCTCATGCACTTCCTGAGCCATATAGAAGACTTATGACAGATCCAAACTCACCAATCATTGATTTTTATCCTATTGACTTTGAAGTTGACATGAATGGAAAACGCTTTGCATGGCAGGGTATTGCTAAGTTGCCTTTTATTGATGAAGTGCGTCTTCTTGCAGAAGTTCGAAAGATTGAAAATTTTTTAACACCTGAGGAAAAGCGACGGAATGCTATAATGTTCGACTTGCTCTTTGTGAATTCTTGTCATCCTCTCTCTGTGTGCATAAGTACACTTGACAACAAGTGTAAAAACATGTCAAACAGTGAGAGGGCTGTGGTCAAGGAAAAAATCAATCCTAAAGAAAGTGGTGGAATGAATGGATACATATCCTTATGTGGTGGAGAACCTTGCCCTCCTATCTTTAGGTCTCCTGTTACAAGCATGGAAGACATCATGGACAATCAAGTTATATGTGCAATATATAGACTCCCAGATGCACATAAACACATTACCCGACCACCACAAGGAGTTAAATTTCCAAAAAAGACTGTTACCATTGGAGATCTAAAACCTGAACCTGTTTTATGGCATGAAGATTCAGGAAGGAGACACCATGCTGAAAATGGGAGGAAAAACCCCCCAGGATCTTCTTCCGGTCGGGAGCTTGGAGAGGCTGCACACAGACTCATTGTCAATTCCTTACAGGTAAAGGTTGATAATGGCTACCACCACGCACATAATGGACCTCCTATATCTTATCCTGCACCAATGGGTCATCGACCACCAGTGTCTTCCTATGGTTATGAATCACACCCAGGATACGTTGCAATGCCACCTCATGTTTCTGCTCCCTCACTCCAAGGCAGACCCCAGATTACGCCTTACGGTGCTGTCCCTACTGCTCAGCAGTATGGTTACAATCAACCATACCTGCCGCCACCAGTGGCATACAATCCTCGTCAGCAATCAAATTCTTACGAAAGAAATGACTATCAACATTCTAGATCACATCATTATGAAAGAAATCACCATCAGGGTAGTGGGGGTAGTTTAAGGCATGGATATCAATCGTCAGGAATTAATCAGAATAACAGGTTTATGAATAATACACAAGGTGCATATGTCAGTCACCATCATGAAGTTAGTCACCACAGCCAAAACTTCCAACCATCTCGAATTCATCAGAATTGGACTCCACGAAACAACCCGAGTGGAAGCAGGGAATATGGTCATCAGTCGTCCAATCAATTTGCATCATTAGATAGAAGAGGAAACAGGAATCCAATGCCTCCACCTGGTTACGATCGCCAATAA 1770 0.4271 MSDPVTHISCPRIGPISLQWTSLVPSSVSGIEGSNIDSSLYTGALFWPREEVTCFKHVCATPKIKLYIPLNKLPSIVESDLPSPLTWPWLVLKYTEGLCWVMHYYYEGVCSWNWFYPYHYAPFASDLKGLGELDISFKLGTPFKPFDQLLGVFPAASSHALPEPYRRLMTDPNSPIIDFYPIDFEVDMNGKRFAWQGIAKLPFIDEVRLLAEVRKIENFLTPEEKRRNAIMFDLLFVNSCHPLSVCISTLDNKCKNMSNSERAVVKEKINPKESGGMNGYISLCGGEPCPPIFRSPVTSMEDIMDNQVICAIYRLPDAHKHITRPPQGVKFPKKTVTIGDLKPEPVLWHEDSGRRHHAENGRKNPPGSSSGRELGEAAHRLIVNSLQVKVDNGYHHAHNGPPISYPAPMGHRPPVSSYGYESHPGYVAMPPHVSAPSLQGRPQITPYGAVPTAQQYGYNQPYLPPPVAYNPRQQSNSYERNDYQHSRSHHYERNHHQGSGGSLRHGYQSSGINQNNRFMNNTQGAYVSHHHEVSHHSQNFQPSRIHQNWTPRNNPSGSREYGHQSSNQFASLDRRGNRNPMPPPGYDRQ 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01996 589 PANTHER 5'->3' EXORIBONUCLEASE 91 562 IPR027073 -
Spst8g01996 589 MobiDBLite consensus disorder prediction 501 528 - -
Spst8g01996 589 MobiDBLite consensus disorder prediction 538 574 - -
Spst8g01996 589 FunFam 5'-3' exoribonuclease 130 230 - -
Spst8g01996 589 MobiDBLite consensus disorder prediction 350 373 - -
Spst8g01996 589 MobiDBLite consensus disorder prediction 456 589 - -
Spst8g01996 589 Pfam Xrn1 helical domain 90 340 IPR041412 -
Spst8g01996 589 Gene3D - 133 230 - -
Spst8g01996 589 MobiDBLite consensus disorder prediction 482 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01996 Spst-Chr8 27279993 27291032 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01996 8 27279993 27291032 Spst8g01996 8 27279993 27291032 ECH