Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01993 ATGGACCGACGCTGGCCATGGAAGAAAAAATCGTCGGACAAGGCTGTGATGGAGAAAGCAGCTGCAGAATTGGACTCTGCTGCGAGTGCTGCTACTCAGAAGCCGAGCTACGTCCAAATCTCAGTAGAGTCATATTCCCATCTGACTGGTTTGGATGATCAAGTGAAGGCATATGAAGAAAAGGTTCAGACACTGGAGGATGAGATCAAGGAATTAAATGAAAAACTGTCTGCAGCTAATTCGGAGATAAATACAAAGGAAAGCCTGGTAAAACAGCATGCTAAAGTTGCAGAAGAGGCTGTCTCAGGCTGGGAAAAGGCTGAAGCAGAAGCTTTAGCTTTGAAGAACCATTTGGAGTCTGTCACTCTTGCAAAACTCACTGCTGAGGACCAGGCATCACAGTTAGATGGTGCTCTCAAAGAGTGTATGCGACAGATAAGAAACCTGAAGGAAGAACATGAACAGAAATTGCAGGAAGTTGCTCTCACAAAAACCAAGCAATTGGACAAGATTAAGGGTGAGCTTGAGTCTAAGATAGCAAGCTTTGAACAGGAACTTCTCAGGTCTGCTTCCGACAATGCAGCTCTGTCAAGGTCCTTGCAAGAGCGCTCTAACATGATAGTCAATTTAAGGGAAGAAAAAGCTCATGCTGAGGCTGAAATTGAGCTTCTTAAGGGAAATATTGAATCATGTGAAAGAGAAATCAATTCTCTCAAATATGAGGTTCATGTTATTGCCAAAGAGCTTGAGATTCGCAATGAAGAAAAGAACATGAGTATGAGGTCTGCAGAAGCTGCTAATAAGCAACACATGGAGGGTGTTAAAAAAATTGCTAAATTAGAGGCAGAGTGCCAAAGATTACGAGGTCTAGTGCGGAAAAAGTTACCAGGTCCAGCTGCACTTGCACAAATGAAGCTAGAAGTTGAAAGTCTTGGTCGAGAATATGGAGAAACACGATCAAGAAAGTCTCCTGTCAAACCCCCTACTTCTCACCTGTCCTCGATGCCTGGGTTCTCCCTCGATAGTGCTCAGAAATTCCACAAAGATAATGAATTTCTCACAGAGCGTTTGCTGGCAACGGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGGCAAAACGTAATAGTGAACTGCAGGCTTCAAGGAGTATGTTTGCTAAAACTTTGAGTAAACTTCAAATTTTGGAAGCACAAGTTCTGACAAGTAATCAGCAGAAGGGATCTCCTAAATCCATCATAAATGAAAGCATTTACAGTCAGAATGCAAGCAATGCACCAAGCTTGATCTCCATGTCTGAAGATGGAAATGATGATGTTGTAAGTTGTGCTGAGTCTTGGTCTACAGCCATTCTCTCTGATCTATCCCAACTTCCTAAAGGAAAAAATACTGAGGAATTGAGCAAATCTGATGCAACTAAGAAGTTGGAACTAATGGATGACTTTCTGGAGGTGGAGAAATTGGCTCGATTATCAAATGATTGCATTGAAGTTTCAGGTAATTCAAATAATATAGCAAATGAAACTGCGACAAACGATGTATCAGAAGTCAGTGTTCCCTCTAACTCCCAAGAGAATAGTGACCCAAATCCATTGCCAATTGAGGTGTCTTCTGCTGAGGAATTATCAGCATCTGATCCCCAATCTGATGTTCCTAGCTTGTCGCTAGCAGAGCTTCAATCAAGAATATTATCAGTTTTCGAGTCCATGGCTAAGGATGCTGATATGGAGAAGATATTGAAGGATATTAAACACGTTCTTGACGATGCATGTGACATTTCCGTCCAGGACTCTGTATCTGCCGTTCCCCATTATGTCATACCTTCTGATGTTACGTGTGATAAGCAGGGTGACACTGAAGATGCTGGCTTAAACTCAGAGAAAGAAGTTATTTCATCCCAGCAACATCCAGAGTATATGCAGATAACTACGGATTTAGAAATGGCAATTTATCAAATTCATGACTTTGTGTTGTTCCTAGCCAAAGAAGCAATGGCAGCACATGATATATCTTCTGATGGAGATGGAATAAGCCAAAAGATGCAGGAGTTCTCTGTCACTTTTAATAAAGTTACATCCAATGAAGCAAGTTTGCTACAGTTTGTTCTGGACCTGTCTAATGTACTAGTCAAAGCAAGTGAATTCAGATTTAATATCCTTGGTTATAAGGGTACGGAAGCTGAAACTAACAGTCCTGATTGCATAGATAAGATTGCTCTGCCGGAAAATAAGTTAGTTCAAGACAATTCATCTGGAGAGAGATATCAAAATGGTCATTCCCATATTCTTAATCCCTGTTCTGATCCTGAGGTTCCTGATGATGGAAATTTGGCCTCGGGCTATGAATCAAAAGCCACGTCACAGAAGTTCTCAATGGAGAAGTTCGAAGAATTGAAGTTAGAGAAAGAGAAGGCAGTCGCTGATCTAGTAAAGTGTTGTGAAAATCTTGAAATGACGAAGTCTCGGTTACTAGAGACAGAGCAGCATCTAGCTGAAGTTAAATCACAGATGGCTTCTGCTCAAAGATCAAATAGCCTGGCTGAGACACAGCTAAAATGCATGACAGAATCGTACAGGTCAATTGAAATACGTGCAAAGGAGTTTGAGACTGAGCTTAATCATCTGCGAATGAAGACAGAAACTCTGGAGAATGAACTGGAAGATGAAAAGAGGGCTCATGAAGCAGCTTTGGCCAAATACAAGGAGCTAGAAGAACAACTAAAAAGGAATGAGAGCGCAGCTGCTGATAATGACGTTAAGACTAAGCAGGAGAGAGACTTGGCAGCTGCTGCTGAAAAGCTAGCTGAGTGTCAGGAAACCATATTTATTCTTGGCAAGCAGCTAAAAGCTCTGCATCCTCAAACAGAGCAAATGGGATCTCCTTATTCAAAGGGTGAAGGCGTCACAGAGCGTGAACCTATTAGCCCAAGTTTTCAAGATCGAGCAGAGATGGACAGTGCTACTTCTGCATTTGTGCAAAGACTGGGAGGAGAGTCCCCCTTACATTTTACCAACAGTTTATTTAGTCCATCAGATAACGAGTCAATCTTTCCAGCCATATCTTCTGTACAGAATTCAAACCACAGGCCTACCATGTCTTCCTCGTCGTCAGCTTCTTCCACTCCAACACCAGACAAACACACCCGAGGTTTTAGTAGATTCTTTTCATCAAAAGGTAAAAACGGTCATTGA 3189 0.418 MDRRWPWKKKSSDKAVMEKAAAELDSAASAATQKPSYVQISVESYSHLTGLDDQVKAYEEKVQTLEDEIKELNEKLSAANSEINTKESLVKQHAKVAEEAVSGWEKAEAEALALKNHLESVTLAKLTAEDQASQLDGALKECMRQIRNLKEEHEQKLQEVALTKTKQLDKIKGELESKIASFEQELLRSASDNAALSRSLQERSNMIVNLREEKAHAEAEIELLKGNIESCEREINSLKYEVHVIAKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGREYGETRSRKSPVKPPTSHLSSMPGFSLDSAQKFHKDNEFLTERLLATEEETKMLKEALAKRNSELQASRSMFAKTLSKLQILEAQVLTSNQQKGSPKSIINESIYSQNASNAPSLISMSEDGNDDVVSCAESWSTAILSDLSQLPKGKNTEELSKSDATKKLELMDDFLEVEKLARLSNDCIEVSGNSNNIANETATNDVSEVSVPSNSQENSDPNPLPIEVSSAEELSASDPQSDVPSLSLAELQSRILSVFESMAKDADMEKILKDIKHVLDDACDISVQDSVSAVPHYVIPSDVTCDKQGDTEDAGLNSEKEVISSQQHPEYMQITTDLEMAIYQIHDFVLFLAKEAMAAHDISSDGDGISQKMQEFSVTFNKVTSNEASLLQFVLDLSNVLVKASEFRFNILGYKGTEAETNSPDCIDKIALPENKLVQDNSSGERYQNGHSHILNPCSDPEVPDDGNLASGYESKATSQKFSMEKFEELKLEKEKAVADLVKCCENLEMTKSRLLETEQHLAEVKSQMASAQRSNSLAETQLKCMTESYRSIEIRAKEFETELNHLRMKTETLENELEDEKRAHEAALAKYKELEEQLKRNESAAADNDVKTKQERDLAAAAEKLAECQETIFILGKQLKALHPQTEQMGSPYSKGEGVTEREPISPSFQDRAEMDSATSAFVQRLGGESPLHFTNSLFSPSDNESIFPAISSVQNSNHRPTMSSSSSASSTPTPDKHTRGFSRFFSSKGKNGH 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01993 1062 Coils Coil 132 166 - -
Spst8g01993 1062 Coils Coil 200 241 - -
Spst8g01993 1062 MobiDBLite consensus disorder prediction 499 532 - -
Spst8g01993 1062 Coils Coil 246 283 - -
Spst8g01993 1062 MobiDBLite consensus disorder prediction 1013 1046 - -
Spst8g01993 1062 MobiDBLite consensus disorder prediction 313 340 - -
Spst8g01993 1062 Coils Coil 815 849 - -
Spst8g01993 1062 Coils Coil 857 912 - -
Spst8g01993 1062 Pfam Filament-like plant protein, long coiled-coil 86 957 IPR008587 -
Spst8g01993 1062 Coils Coil 350 370 - -
Spst8g01993 1062 Coils Coil 919 939 - -
Spst8g01993 1062 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1057 - -
Spst8g01993 1062 MobiDBLite consensus disorder prediction 1013 1062 - -
Spst8g01993 1062 MobiDBLite consensus disorder prediction 499 533 - -
Spst8g01993 1062 Coils Coil 48 89 - -
Spst8g01993 1062 MobiDBLite consensus disorder prediction 323 340 - -
Spst8g01993 1062 SUPERFAMILY Tropomyosin 792 956 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01993 Spst-Chr8 27240788 27245219 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01993 8 27240788 27245219 Spst8g01993 8 27240788 27245219 ECH
Spst8g01993 8 27240788 27245219 Spst9g00298 9 2818153 2822793 PCT