Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01988 ATGGGTTCAGTTTCTCTGAAAATTGGAGATGGAACAGCCAGATTCCAAAGAGCAACACTGTGTTCTTCAGCTGTTAACATTCTCATGATTTTCTCTGTCATCACCACCAACCTCTTTGCTCTCTATGCGTTCACTGCTTCCCCGAAACACCCCCATCACCTTCTCCACCACCATGCTCAAAAGAATATTTCTCTAATCTCGGAGCAGGTCTCACTCATTCTCAGAGAGATCGATTTGTCGCAAAAGAAACTGGCGCAGATGGAGAAAGAGCTTCTGGGCTACGAAAGCATTGATCTTTCGAGGCCCAACATTGCATCCGAGCTCAAACTCTTCCTCCAGCGACACCAGCTTCCTCTGGGGAAAGACTCAAGAACTGGGATCACTGAGATGGTGCCATCAGTGGGCCACAGCTGTGAGAAAAATTCAGACCTGTTGTCTCAGTTCATGAGTTACAAGGTTTTCGGAACTTGTCCTGATGATTGGAGTGTGGCGCAGAAGCTGATCTTAAAAGGGTGTGAACCTTTGCCTAGGAGGAGATGCTTTGCAAAGACTGTTCCCAAGGTAGGTTTATACCCCTTTCCAGATTCTCTTTGGAAGCCTGTTGGTAATAAGACTGTTAACTGGAGTGGTCTGGTTTGTAAAAATTTTGAGTGTTTGAATGGTAAGAAGTTGAGTAAGGAGTGCATTGGTTGCTTTGATTTGGTCCATGGCAATGAGAATGTTAGGTTTGTGAAGAGTAAGAGTAAGAATGACTTTCTGGTTGATGACGTGTTGACCTTGGGAGGCGGAGGGATTAGAATAGGGCTTGACATTGGTGGCGGGTCTGGATCCTTTGCTGCTAGAATGGCTGATAGGAATGTCACTGTGATTTCTAACACTCTCAATGTTGATGCCCCATTCAGTGAGTTCATTGCTGCAAGAGGGCTTTTTCCTCTTTACTTGAGCTTGGATCATAGGTTTCCTTTCTATGACAATGTGTTTGACTTGGTTCATGCTTCAAGTGGCTTGGAGGTTGGAGGAAAGAGTGAGAAATTGGAGTTTTTGATGTTTGACATTGATAGAGTTTTGAGGGCAGGTGGTTTGTTCTGGCTGGATAACTTCTTTTGTGCCAATGAAGAGAAGAAGCAAGCTTTGACTAGGTTGATTGAAAGGTTTGGATATAAGAAGTTGAAATGGGTTGTGGGAGAGAAGGTTGATAGTGTTGGATCTGGCAAACCTGAAGTTGTGTTATCTGCTGTCCTTCAGAAACCTGTTAGAGTTTAG 1263 0.4426 MGSVSLKIGDGTARFQRATLCSSAVNILMIFSVITTNLFALYAFTASPKHPHHLLHHHAQKNISLISEQVSLILREIDLSQKKLAQMEKELLGYESIDLSRPNIASELKLFLQRHQLPLGKDSRTGITEMVPSVGHSCEKNSDLLSQFMSYKVFGTCPDDWSVAQKLILKGCEPLPRRRCFAKTVPKVGLYPFPDSLWKPVGNKTVNWSGLVCKNFECLNGKKLSKECIGCFDLVHGNENVRFVKSKSKNDFLVDDVLTLGGGGIRIGLDIGGGSGSFAARMADRNVTVISNTLNVDAPFSEFIAARGLFPLYLSLDHRFPFYDNVFDLVHASSGLEVGGKSEKLEFLMFDIDRVLRAGGLFWLDNFFCANEEKKQALTRLIERFGYKKLKWVVGEKVDSVGSGKPEVVLSAVLQKPVRV 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01988 420 Coils Coil 70 90 - -
Spst8g01988 420 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 24 419 - -
Spst8g01988 420 Gene3D Vaccinia Virus protein VP39 241 401 IPR029063 -
Spst8g01988 420 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 249 388 IPR029063 -
Spst8g01988 420 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 261 389 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01988 Spst-Chr8 27044828 27046090 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01988 8 27044828 27046090 Spst8g01988 8 27044828 27046090 ECH
Spst8g01988 8 27044828 27046090 Spst9g00300 9 2838010 2839269 PCT