Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01983 ATGAAATCATCTTTTTCAATCCTTTTCACAATTCTCCTCCTCGTAGTCGTACTCCCGCCGTGGTGTCCTACATCCGCCAGTGGTGGTGGCCAGTGGCAGCTCCTCCAGAAAAACATCGGCATTGTCGCCATGCACATGCAGCTCCTCCACACTGACACTGTCGTTATCTACGATCGTACCGACTTCGGCCTCTCCAACCTCTCCCTCCCCGGCGGTCGCTGCCGCAATGACCCCAACGAAAAAGTCGTGAAAATTGACTGCACAGCCCATTCCATCGAATACGACGTCCCCTCTAACACCTTTCGCGCCCTATTCGTCCAAACTGACGTCTGGTGCTCCTCCGCCTCCGTTGCCCCTGATGGCACGCTGGTCCAAACCGGTGGTTTCAACGACGGCGAAAGAGTTGTCAGGACATTCTCTCCATGCTCTACCTGCGATTGGAAAGAAATCTCAAACAGCCTCGTGGTGCGCCGCTGGTATTCCACCAATCATAAACTCCCCGATGGCCGGCAAATTATAGTCGGCGGCAGAAGTGCAATGAACTACGAGTTTTATCCTAAAACCGACGCCAATGCCAAAAATGCCTACTCCTTACCCTTCCTCGTTCAAACCAGAGACCCGAAGGAAGAAAACAACCTCTACCCTTTCGTTTTCCTCAACGTGGATGGCACCCTCTTCATCTTCGCCAACAACAGAGCCATTCTCTTAGACTACACCAAAAACGTCATCGTTAAAACGTTTCCCAACATTCCCGGTAACGATCCCAGGACTTACCCCAGCACAGGTTCCGCTGTTCTCTTACCCTTACGTAAGAAAAACCGACACTCTCTTCTTTCCGAAGCTGAGGTTTTAATTTGTGGGGGAACCCCAAGAGGGGCTTATACTCAAGCCCAAAAGGGTAAATTTCTCGCATCATTGAATACTTGCGCTCGGATTAAAATAACCGACCCGAACCCATCCTGGGTCATGGAGAAAATGCCCGGAGGTAAAGGCAGACTCATGAATGACATGATTCTTCTTCCAAACGGTAACGTTTTGATTATTAACGGTGCGAGTTCTGGGAGCGCCGGCTGGGAATTTGGGCGCGACCCGATTTTGGCTCCGTATGTTTATAACCCAGATAAGGAACCCGGGTCGAGATTTGACATTCTTAAAGCAACGAATACTCCGCGAATGTATCACTCAACTGCGATTTTGCTTCGTGATGGGAGGGTTCTCGTTGCAGGGAGTAACCCTCACGAGAAGTACAATTTCTCGAATGTATTATTCCCCACCGAGCTTAGCATGGAAGCGTTTTCCCCTCCGTATTTGGAAACGGTGTTTGATAACGTGCGTCCGACAATCCTTGGTCCAAAGTCGGGGAAGAGCATTTCGTACGGGCAGAAAGTGAAGGTTTTGGTCGACGTGGCGGGTGGGGAGTTGAATCGGAGTTTGCTGCGGGTGACGGTGCTGGCGCCACCTTTAAGCACGCATTCTTTTTCCATGAATCAGAGGATGCTGGTGCTTGAACCTAGCAACGTGACAAACGTGAATGGACGACCAACAACGTTTGAGATTGAGATTACCACACCGGGTTCGCCCGTTCTTGCACCACCCGGTTTTTATCTACTGTTTGTGGTCCACCATAACGTTCCAAGCGAGGGAATTTGGATCCAAATTCTTTAA 1665 0.5021 MKSSFSILFTILLLVVVLPPWCPTSASGGGQWQLLQKNIGIVAMHMQLLHTDTVVIYDRTDFGLSNLSLPGGRCRNDPNEKVVKIDCTAHSIEYDVPSNTFRALFVQTDVWCSSASVAPDGTLVQTGGFNDGERVVRTFSPCSTCDWKEISNSLVVRRWYSTNHKLPDGRQIIVGGRSAMNYEFYPKTDANAKNAYSLPFLVQTRDPKEENNLYPFVFLNVDGTLFIFANNRAILLDYTKNVIVKTFPNIPGNDPRTYPSTGSAVLLPLRKKNRHSLLSEAEVLICGGTPRGAYTQAQKGKFLASLNTCARIKITDPNPSWVMEKMPGGKGRLMNDMILLPNGNVLIINGASSGSAGWEFGRDPILAPYVYNPDKEPGSRFDILKATNTPRMYHSTAILLRDGRVLVAGSNPHEKYNFSNVLFPTELSMEAFSPPYLETVFDNVRPTILGPKSGKSISYGQKVKVLVDVAGGELNRSLLRVTVLAPPLSTHSFSMNQRMLVLEPSNVTNVNGRPTTFEIEITTPGSPVLAPPGFYLLFVVHHNVPSEGIWIQIL 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01983 554 CDD E_set_GO_C 441 553 IPR015202 -
Spst8g01983 554 Gene3D Immunoglobulins 444 554 IPR013783 -
Spst8g01983 554 PANTHER SECRETED PROTEIN-RELATED 9 553 - -
Spst8g01983 554 SUPERFAMILY E set domains 441 553 IPR014756 -
Spst8g01983 554 Gene3D - 26 440 IPR037293 -
Spst8g01983 554 Pfam Glyoxal oxidase N-terminus 44 288 IPR009880 -
Spst8g01983 554 FunFam Aldehyde oxidase GLOX 26 443 - -
Spst8g01983 554 Pfam Galactose oxidase-like, Early set domain 445 553 IPR015202 -
Spst8g01983 554 SUPERFAMILY Galactose oxidase, central domain 91 438 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01983 Spst-Chr8 26881591 26883255 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01983 8 26881591 26883255 Spst8g01983 8 26881591 26883255 ECH
Spst8g01983 8 26881591 26883255 Spst9g00307 9 2893755 2895532 PCT
Spst9g00306 9 2887750 2889411 Spst8g01983 8 26881591 26883255 PCT