Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01981 ATGGAGGGAGAGGATATTAGGTCTGGGACCAGGAAGAAGCGATCCAAGAAGGAAATTGGTTTTGACTCTGACGACGACGAGCCCATTGGGTCAATCTTTAAGCTAAAGAGGTCCAGGAAGAAGGGTAGTGGTAGTGGTGATGCTGTTAGGGAGAAGGAGGATTTGGGGGGTATGGATGATAATGATACCTTGGCTAGCTTTAGGAAGAGATTGAAGGGTCCTAAGAGAGATCAGGGATCTGGGGTTGCAAGAGGAGCTAGTCTTGCTTTGCATGTGCCTGATGAAGATTTGGTTGGTTTGGGAGCTAAGGGTAGGGATGAGAAAGGGGTGGCCTTGGTGCCTGGTGGTGAGGACATGCAGATGCACGATTCTTCTGATCAACACATGGAGGATTCGTTGTCTGCAATTTTTCACAAGGCACAGTCTAGTTCTGCTAGGAAATCTCGTGGGGGTTCGCGGCACAAAAGGGGGATTCAGAAGGTGGATAGTGGGTTGAGCCATGCAGGTTTTGTGGAAGCTGTGGATTCTGTGGTTGAAAGTAGATCTGGATCTGCTTCTGGCTCGAAATTGGTTGTGGGGAATGTCATGACTGATGATGCTTTGCCTCAAGCGTCTGAACCGGTTATAACATCTGTGGTGGAGGATCAAAAGTGTGTTGATGACTGTTTTCAAGAGGAAACTACAAAGGGTGAATGTGATTTGGACATTCCAGATGGACGGACTACGTCAAATGATGTCTATCATGGAGATAGGCATCATGCTTCTTGTGTTGCACAAGATGAAGAAATTTGTTGTGATTCTGACCAGAAGATTGCATTGCAGGAATGTGTTATCGGTGGTGGTTTAAATAAGTTATCTTCCGTGTTACATGATGAAATAGTTGATACTGCCTCTCTCTCCAAAGTGGGGGAAGGGGAAAGGCGATATACTGAGGTTGGAGAGTTTGCGAATAGATTGACTGATAAACTTGCACAAGCGTGCACCAGTGCTTCAGAACATGATGTTTCTACTTCTGCAGGGAAAGAAAATGTATTAACATCTTGCCACACTGAAAATATATTGAAAGAGAGTAATAATATGGTTTGTGGAAAAGTTTTTCAGGAATCTTCGTGTAATGGAGCTCTAAAGTTATCTGGATGCCATATGGAAGTAGATGGAGGTGGAAAATCAGAAACTGAGTTTGTTTCTGATAGAAATTTCTGTGATAATAGTAATTTAAATACAAAGGCTGAAGTGCAAGGTTGTGTTCTAGATTTTTTGCCTAAAAGAAATGATGTAACTGTTAGTGGTTCTTCTTTGGTGTCCAATGAAGCTGAATTGGCTGGCCACTCAAATCACCCAGAGAAAACTGTAGAAGCTTGCAATATTCCAAAAGACTCCACTGCTTCAATTCTGAAATGTAGTTCAGGTTTTGATCCAATTCAATCAGATGGATCCTCTCTTCAATCTTCAATTCCAGATGAAAATGGGAACTCTGCAGAATACCATCCCTCTGTGTCTGATTTTGTTGATAACGATGGTAAGATATCAAGCATTCCACGGGTGCGAAGGGCCAAAATGCGTAAGCATGGAGACATGACATATGAGGGGGATGCTGATTGGGAGATTTTAATTAGTGATCAAGCTTTAAATGAAAATCAAGTTATGACAGATAGTGACCGCACTCTTAGAACAAGAATGAAGCATGATTCCTCTTTGAATACTGGGGAAGATTCTGAAAATGTTGCAGTAGTAGCAGTATCAGCTGGGCTGAAAGCCCGTAAAGCTGGTCCAATAGAGAAAATAAAGTTTAAAGAGATCTTCAAGCGTAAAGGTGGTCTCAAGGAATATTTGGATTGCAGAAATCAGATTTTAAGCCTTTGGAGCAGAGATGTCACACGTATTTTGCCTCTTGCTGAATGTGGAGTTAGTGATACCGACTCTGAGGATGGAAGTCCTCGTTCTTCTCTTATTAGGGAGGTCTATGCATTTCTTGATCAATATGGTTATATAAATGTTGGAATTGCCTCCCAGAAGGAGAATGTTGGGAGTAGTGCAAGGCATTGTTATAAACTGGTAAAAGAAAAAGGTTTTGAGGAAAGTCTTGCAGCTTCAGTGGCTGACTCTGAAGATGGAGTTTCCTTTCTTGTTGGCCAGACTAAAATGTCAGATACTTCCAATGAGATTAACAATGGTCTAACTAAGGATTGCAATGACCTAACAACTGAAGCTACAGAAGGCATGAGGCACACTAATGAAGTGATGGTGGATTTGTCAAACATAATACAACAGGCAGAAGGAAAAAAAATTGATTACCAGGAAATTGATGGGTTTCAGGATGGAACTATACATGTGGCTAATGACAGTTCTGTTCCTTCTTCCAACTTTGCTGATTGCAGATTGACTTCTCTGGTAGCTAAAGAGAAAAGCAATGACTCTACCTGCATTAGATCTGTCTCGCGTGGTCAGGTAGGTGACAATCTGCAGTCTGATTTATATCCTAGAAAGACAGTAATTGTCATTGGAGCTGGGCCTGCTGGGTTAACTGCTGCTCGCCACTTGCAACGTCAGGGATTTCCTGTAACTGTGCTTGAGGCTAGGAGTAGAATAGGAGGTCGTGTGTTTACTGACCACTCCTCACTTTCTGTCCCTGTTGATCTCGGTGCAAGCATTATAACCGGTGTTGAGGCTGATGTGGCCACTGAGAGAAGACCAGATCCTTCCTCATTGATATGTGCTCAGTTGGGCCTTGAGTTGACAGTGTTGAACAGTGATTGCCCTCTTTATGACATAGTGACAGAACAAAAAGTTCCTGCAGATATGGATGAAGCACTTGAAGCTGAATATAATAGTCTTATAGATGACATGGTATTGGTCCTTGCACAGAAAGGTGAACAGGCAATGAGAATGTCTCTTGAAGATGGTTTAGAATATGCCCTCAAGATTCGTCGGATGGCACGCTCTGAAAGCAGTGAAGAAACTGAACAAAATAATTCTGCAGATAGACAATGTGATTCCAAAAAGGATAGTACCGTGGATAAAAAACTTGATGAGGAGATATTGAGTCCTCAGGAGAGGAGGGTTATGGATTGGCACTTTGCTCATTTGGAGTATGGTTGTGCTGCTTCACTTAAGGATGTTTCTCTTCCCTACTGGAATCAAGATGACGTGTATGGAGGTTTTGGGGGAGCTCATTGTATGATTAAAGGGGGCTACAGTTCTGTTGTTGAGTCTCTGGGAGAAGGACTTACAATTCACTTGAACCATGTCGTAACAAATGTGTCATATGGTATCAAGGAACCTGGTCAGAGTTATAAAGTCAAAGTTTCTACATCAAATGGCAATGAGTTCTTTGGTGATGCTGTCCTTGTTACTGTTCCACTTGGCTGTTTGAAGGCTGAAACTATACAATTCTCCCCACCTTTGCCACAGTGGAAATGTTCTTCTGTTCAGCGTCTTGGTTATGGAGTTCTAAATAAAGTGGCCTTGGAATTTCCTACTGTATTTTGGGATGATGCGGTGGACTACTTTGGAGCAACAGCCGAGGAGAGAAACAGTAGAGGTCACTGCTTTATGTTCTGGAATGTCAGGAAAACAGTTGGAGCTCCTGTCCTTATTGCATTAGTGGTTGGTAAGGCAGCCATAGATGGTCAAAGCTTGAGCTCTTCTGATCATGTTAAACATGCATTGAAGGTTCTCCGTAAACTTTTTGGGCAGGATTCAGTTCCCGATCCTGTTGCCTATGTTGTGACTGATTGGGGTAATGATCCTTTTAGCTATGGTGCTTATTCTTACGTTGCTGTAGGAGCCTCAGGAGAAGACTATGATATATTAGGGAGACCAGTTGAAAATTGCTTGTTTTTTGCTGGTGAAGCAACCTGCAAAGAGCACCCAGATACTGTTGGTGGTGCAATGATGAGTGGATTACGGGAGTCCGTTCGCATAATTGACATATTGAGCACTGGAAATGATTATATTGCTGAGGTTGAGGCATTGGAAGCTGCACGGGGACAGTTAGACACTGAAAGGGATGAAGTGAGGGATATAATAAAGAGACTTGATGCAGTAGAACTTTCTAATATAATGTACAAGAACTCTTTAGATGGTGCTCAAATTTTAACCCGGGAAGCTTTGTTAAGGGAAATGTTCTTTAATACGAAAACCACTGCTGGGCGCTTGCATGTGGCCAAACAATTGCTAACACTTCCTGTTGGAAACTTGAAGTCTTTTGCTGGAAGTAAAGAGGGGCTAGCCATTCTCAATTCATGGATACTGGACTCTATGGGAAAGGATGGTACCCAACTCTTGAGGCACTGTTTGCGACTTCTTGTTCGTGTTTCAACTGATCTTCTTGCTGTACGATTATCAGGAATGGGAAAAACAGTGAAGGAAAAAGTTTGTGTACATACTAGCCGTGATATTCGTGCTATAGCAAGCCAGTTAGTCAATGTATGGCTTGAAGTTTTCCGCAAAGAAAAAGCTTCTAATGGTGGATTAAAGTTACCAAGACAAACAACTGCTATAGATTTATCGAAGAGAAAATATGCAAAAGATTCAGCCTCGGGAAAACCACCTCTAAGCACATATCATAGTACCATTGAGAATAAAGGAGGCTTGCTGAATCCTACCTCTGCTGGAAGCAATTCACCTTCCAACGCTCATGTGAAGAAATTGCACAGCAAACAAGGAAGACAACCAGTGGCATATGACTCAAGGCATGAAGTCAGTTCTTCCAGGTCTAAAGGTTCAATAGATAGAGTAGTTACAGAGAAGGAGGATAACCACTGTGCTATATCAGAAGAAGAACAAGCTGCTATAGCTGCTGCAGAGGCTGCCCGTGCTAAAGCCCTTGCTGCTGCTGAGGCATATGCCTCTGCTGAAGCCAGATGCAATTCACTCTTGCAGCTTCCGAAGATACCCTCATTCCACAAATTTGCTAGACGTGAGCAGTCCTCACAAAATGACGAGTGTGATAGTAGAAAGAGATGGTCAGGTGGTGTTTTTGGAAGGCAAGATTGTATTTCAGAGATTGATTCGAGGAATTGCAGAGTTAGGGACTGGTCTGTTGATTTCTCGGCTGCTTGTGTGAATCTAGATAATTCCCGAATGCCAGTTGATAACCTTTCACAGAGGAGTCATTCAAATGAGATTGCCAGCCATTTGAATTTCAGAGAGCACTCAGGAGAAAGTGTTGCTGGGGACAGCAGTATGTATACAAAAGCGTGGATTGACACAGCTGGTGGTGTTGCAATTAAAGACCATCATGCTATAGAGAGATGGCAATCCCAAGCGGCTGCTGCTGATTCTTTCTTTTCTAACCCAACTATTCATTTGAAGGATGAGGAGGACTCAAATGCCTGTTCAAAGCTACCCAGCTGGAAGCGTGATGGTGTTGCAAATGAGAGCTCTATTTCACAGGTTACTGTAAATAAGGATGCCCTAAAGAGTCATTCCCGAGCAGCAGATCATATTAAACAGGCTGTTGTGGACTATGTTGCATCACTACTTATGCCCCTTTACAAGGCAAGAAAACTAGACAAGGATGGATACAAGGCTATAATGAAGAAAAGTGCAACAAAGGTCGTGGAGCAAGCCACAGATGCAGAGAAAGCCATGACTGTACGTGAGTTTCTAGATTTTAAACGAAAGAATAAGATTCGCTCCTTTGTGGATATATTGATTGAGAGGCACATGACAATGAAATCAGATATGAAATCTTAA 5700 0.4251 MEGEDIRSGTRKKRSKKEIGFDSDDDEPIGSIFKLKRSRKKGSGSGDAVREKEDLGGMDDNDTLASFRKRLKGPKRDQGSGVARGASLALHVPDEDLVGLGAKGRDEKGVALVPGGEDMQMHDSSDQHMEDSLSAIFHKAQSSSARKSRGGSRHKRGIQKVDSGLSHAGFVEAVDSVVESRSGSASGSKLVVGNVMTDDALPQASEPVITSVVEDQKCVDDCFQEETTKGECDLDIPDGRTTSNDVYHGDRHHASCVAQDEEICCDSDQKIALQECVIGGGLNKLSSVLHDEIVDTASLSKVGEGERRYTEVGEFANRLTDKLAQACTSASEHDVSTSAGKENVLTSCHTENILKESNNMVCGKVFQESSCNGALKLSGCHMEVDGGGKSETEFVSDRNFCDNSNLNTKAEVQGCVLDFLPKRNDVTVSGSSLVSNEAELAGHSNHPEKTVEACNIPKDSTASILKCSSGFDPIQSDGSSLQSSIPDENGNSAEYHPSVSDFVDNDGKISSIPRVRRAKMRKHGDMTYEGDADWEILISDQALNENQVMTDSDRTLRTRMKHDSSLNTGEDSENVAVVAVSAGLKARKAGPIEKIKFKEIFKRKGGLKEYLDCRNQILSLWSRDVTRILPLAECGVSDTDSEDGSPRSSLIREVYAFLDQYGYINVGIASQKENVGSSARHCYKLVKEKGFEESLAASVADSEDGVSFLVGQTKMSDTSNEINNGLTKDCNDLTTEATEGMRHTNEVMVDLSNIIQQAEGKKIDYQEIDGFQDGTIHVANDSSVPSSNFADCRLTSLVAKEKSNDSTCIRSVSRGQVGDNLQSDLYPRKTVIVIGAGPAGLTAARHLQRQGFPVTVLEARSRIGGRVFTDHSSLSVPVDLGASIITGVEADVATERRPDPSSLICAQLGLELTVLNSDCPLYDIVTEQKVPADMDEALEAEYNSLIDDMVLVLAQKGEQAMRMSLEDGLEYALKIRRMARSESSEETEQNNSADRQCDSKKDSTVDKKLDEEILSPQERRVMDWHFAHLEYGCAASLKDVSLPYWNQDDVYGGFGGAHCMIKGGYSSVVESLGEGLTIHLNHVVTNVSYGIKEPGQSYKVKVSTSNGNEFFGDAVLVTVPLGCLKAETIQFSPPLPQWKCSSVQRLGYGVLNKVALEFPTVFWDDAVDYFGATAEERNSRGHCFMFWNVRKTVGAPVLIALVVGKAAIDGQSLSSSDHVKHALKVLRKLFGQDSVPDPVAYVVTDWGNDPFSYGAYSYVAVGASGEDYDILGRPVENCLFFAGEATCKEHPDTVGGAMMSGLRESVRIIDILSTGNDYIAEVEALEAARGQLDTERDEVRDIIKRLDAVELSNIMYKNSLDGAQILTREALLREMFFNTKTTAGRLHVAKQLLTLPVGNLKSFAGSKEGLAILNSWILDSMGKDGTQLLRHCLRLLVRVSTDLLAVRLSGMGKTVKEKVCVHTSRDIRAIASQLVNVWLEVFRKEKASNGGLKLPRQTTAIDLSKRKYAKDSASGKPPLSTYHSTIENKGGLLNPTSAGSNSPSNAHVKKLHSKQGRQPVAYDSRHEVSSSRSKGSIDRVVTEKEDNHCAISEEEQAAIAAAEAARAKALAAAEAYASAEARCNSLLQLPKIPSFHKFARREQSSQNDECDSRKRWSGGVFGRQDCISEIDSRNCRVRDWSVDFSAACVNLDNSRMPVDNLSQRSHSNEIASHLNFREHSGESVAGDSSMYTKAWIDTAGGVAIKDHHAIERWQSQAAAADSFFSNPTIHLKDEEDSNACSKLPSWKRDGVANESSISQVTVNKDALKSHSRAADHIKQAVVDYVASLLMPLYKARKLDKDGYKAIMKKSATKVVEQATDAEKAMTVREFLDFKRKNKIRSFVDILIERHMTMKSDMKS 1899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01981 1899 Gene3D - 831 1307 IPR036188 -
Spst8g01981 1899 SUPERFAMILY FAD-linked reductases, C-terminal domain 1147 1258 - -
Spst8g01981 1899 Pfam SWIRM domain 588 665 IPR007526 GO:0005515
Spst8g01981 1899 Gene3D - 574 678 IPR036388 -
Spst8g01981 1899 PRINTS Adrenodoxin reductase family signature 830 852 - -
Spst8g01981 1899 PRINTS Adrenodoxin reductase family signature 853 866 - -
Spst8g01981 1899 SUPERFAMILY FAD/NAD(P)-binding domain 828 1311 IPR036188 -
Spst8g01981 1899 Coils Coil 1325 1345 - -
Spst8g01981 1899 PANTHER FLAVIN MONOAMINE OXIDASE 830 1316 - -
Spst8g01981 1899 SUPERFAMILY Homeodomain-like 573 670 IPR009057 -
Spst8g01981 1899 MobiDBLite consensus disorder prediction 1 63 - -
Spst8g01981 1899 MobiDBLite consensus disorder prediction 1517 1549 - -
Spst8g01981 1899 Pfam Flavin containing amine oxidoreductase 839 1309 IPR002937 GO:0016491
Spst8g01981 1899 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1407 1490 IPR035441 -
Spst8g01981 1899 ProSiteProfiles SWIRM domain profile. 575 675 IPR007526 GO:0005515
Spst8g01981 1899 MobiDBLite consensus disorder prediction 1505 1576 - -
Spst8g01981 1899 MobiDBLite consensus disorder prediction 980 1009 - -
Spst8g01981 1899 Gene3D - 937 1264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01981 Spst-Chr8 26832343 26843318 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-SWI3 Spst8g01981 Amino_oxidase 2.1e-105 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01981 8 26832343 26843318 Spst8g01981 8 26832343 26843318 ECH