Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01979 ATGAACGCAATTCGTTCTCGTGGGTTCATGAGAATGGCGGAAGACATAGGAAAGAGCACCCTCGAATCCTCTGCTGCTGCTTCGACAACAACCTCGCGAGGCTTTTGGCCTTCCGTCTTACGTTGGATACCCTCCTCCACCGACCACATCATCAATGCCGAGAAGCGCCTTCTCTCTCTTGTCAAGACTCCATATGTTCAAGAGCAGGTTAATATAGGTTCTGGTCCACCTGATTCCAGAGTTAGATGGTTCCGTTCATCGAGCAATGAACCACGGTTTATTAACACTGTCACATTTGACAGTAAGGATGATTCTCCTACGTTGGTAATGGTTCATGGATATGCGGCATCACAGGGTTTCTTTTTTCGCAATTTTGATGCACTTGCTACTCGTTTCAGAGTTATTGCTATTGATCAACTTGGTTGGGGTGGATCTAGCAGGCCTGACTTTTCATGCAGAAGCACTGAAGAAACGGAGGCATGGTTCATTGATTCCTTTGAGGAATGGAGAAAGGCCAAAAACCTGAGCAATTTTATACTACTTGGGCATTCTTTTGGCGGTTATGTTGCATCCAAATACGCACTTAAGCACCCGGAACACGTAAAACACTTGATTCTGGTGGGACCTGCTGGAGTTTCGGCGGAATCAGAGAGAATTACGAAGTTCTTATCAACGTGGAAAGGATCAATCCTGAATCAAATATGGGAATCTAATTTTACGCCTCAAAAAATCATCAGGGGTTTAGGTCCTTGGGGTCCTGATATGGTCCGCAAGTATACCAGTGCCAGGTTTATTACACGAACAATCGGGGAAATGCTGACAGAAACTGAATCAAGATTACTGACAGATTATGTTTACCATACTTTAGCAGCCAAAGCTAGTGGCGAGCTGTGCTTAAAATATATATTTTCATTTGGGGCACTCGCGAGGTCACCACTTCTTCACAGGGCATCAGAATGGAAAGTGCCTACCACTTTCATATATGGTTTTCAGGACTGGATGAATTATGAAGGCGCCCAAGAAGCTCGCAAACATATGAAGGTTCCATGTGAAATCCTAAGGGTTCCTCAGGCCGGCCACTTTGTGTTCATTGACAACCCAAGTGGCTTTCATTCAGCTGTGTTTCACGCTTGTCGAAGGTTTCTAAGTCCAGATCCAGACAATGAATCCCTTCCTGAATGGCTAACCGCAGCATAG 1197 0.4511 MNAIRSRGFMRMAEDIGKSTLESSAAASTTTSRGFWPSVLRWIPSSTDHIINAEKRLLSLVKTPYVQEQVNIGSGPPDSRVRWFRSSSNEPRFINTVTFDSKDDSPTLVMVHGYAASQGFFFRNFDALATRFRVIAIDQLGWGGSSRPDFSCRSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVASKYALKHPEHVKHLILVGPAGVSAESERITKFLSTWKGSILNQIWESNFTPQKIIRGLGPWGPDMVRKYTSARFITRTIGEMLTETESRLLTDYVYHTLAAKASGELCLKYIFSFGALARSPLLHRASEWKVPTTFIYGFQDWMNYEGAQEARKHMKVPCEILRVPQAGHFVFIDNPSGFHSAVFHACRRFLSPDPDNESLPEWLTAA 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01979 398 Pfam alpha/beta hydrolase fold 106 367 IPR000073 -
Spst8g01979 398 SUPERFAMILY alpha/beta-Hydrolases 95 374 IPR029058 -
Spst8g01979 398 FunFam Probable 1-acylglycerol-3-phosphate O-acyltransferase 92 378 - -
Spst8g01979 398 PANTHER RE40534P-RELATED 33 375 - -
Spst8g01979 398 PRINTS Epoxide hydrolase signature 355 377 IPR000639 GO:0003824
Spst8g01979 398 PRINTS Epoxide hydrolase signature 194 207 IPR000639 GO:0003824
Spst8g01979 398 PRINTS Epoxide hydrolase signature 180 193 IPR000639 GO:0003824
Spst8g01979 398 PRINTS Epoxide hydrolase signature 322 338 IPR000639 GO:0003824
Spst8g01979 398 PRINTS Epoxide hydrolase signature 131 146 IPR000639 GO:0003824
Spst8g01979 398 PRINTS Alpha/beta hydrolase fold signature 180 193 IPR000073 -
Spst8g01979 398 PRINTS Alpha/beta hydrolase fold signature 194 207 IPR000073 -
Spst8g01979 398 PRINTS Alpha/beta hydrolase fold signature 131 146 IPR000073 -
Spst8g01979 398 Gene3D alpha/beta hydrolase 92 382 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01979 Spst-Chr8 26818739 26822778 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01979 8 26818739 26822778 Spst8g01979 8 26818739 26822778 ECH
Spst8g01979 8 26818739 26822778 Spst9g00310 9 2967829 2972677 PCT