Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01967 ATGGCTGATTTAGGCTCAGCCTCTTCCAGGAGAATGTGGTGCTCCGTTCCAGAAAGAATGCAGCTGCATGTGGCCATGCTGGCCTTGCAGTTTGGCTATGCTGGTTTCCATGTGGTCTCAAGAGCTGCACTCAACATGGGTGTTAGCAAGCTTGTTTTCCCAGTCTATCGTAACATCATTGCCTTGCTTCTACTCCTTCCCTTTGCCTACTTCTTGGAAAAGAAGGAGAGACCAGCAATGAGTTTAAACTTTGCCTGCCAGTTCTTTCTTCTGGCACTTGTCGGGATTACAGCAAACCAAGGTTTCTACTTGCTTGGGTTGGAGAACACATCCCCTACCTTTGCATCAGCAATACAGAACTCTGTCCCAGCCATTACATTTCTCATGGCAGCCATATTCAGAATAGAGCAAGTGAGATTGAACCGAAAAGATGGGTTGGCAAAGGTGGCGGGAACCGTGTTGTGTGTAATTGGGGCTACTGTGATCACACTTTACAAAGGTCCAACAATATATAGCCCAGCAACCCGTGTGAACAGCACGAGCAGCAACGCAATAACAACACCAGTGTTTGATTTTGGGACACTCTCACTGGGAGATGCAAAGGGGAAGAACTGGACCCTGGGGTGCTTATACTTGATTGGACACTGCTTGTCATGGTCTGCTTGGCTTGTGCTGCAAGCACCAGTTCTGAAGAAGTACCCCGCTCGCCTCTCTGTCACTTCCTACACCTGTTTCTTTGGACTCTTGCAGTTCCTGGTCATTGCTTTGGTCCTTGAAAGAGATGCACAGGCTTGGCTTTTCCACTCTGGTGGAGAAGCTTTCACAATTTTATATGCGGGAGTGGTGGCATCAGGAATTGCCTTCGCTGTACAAATATGGTGCATTGACAGAGGTGGCCCTGTGTTTGTTGCTGTGTATCAACCTGTTCAGACTTTTGTTGTCGCCATCATGGCCACCATAGCTTTAGGAGAAGAGTTCTACTTGGGAGGGATCATTGGGGCAGTGTTGATTGTAGGGGGACTGTACTTTGTTTTGTGGGGTAAAAGTGAAGAGAAGAAATTTGCTAGGGAACAGCTTGCGATTGCATCCACCACTGATCACAGCATCATAAGACCTGCAAGCCACGCCAAAGCATCACTTGCTCAGCCACTTCTTTCTTCATCGACTGAGAATGTTTGA 1179 0.4775 MADLGSASSRRMWCSVPERMQLHVAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKKERPAMSLNFACQFFLLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAIFRIEQVRLNRKDGLAKVAGTVLCVIGATVITLYKGPTIYSPATRVNSTSSNAITTPVFDFGTLSLGDAKGKNWTLGCLYLIGHCLSWSAWLVLQAPVLKKYPARLSVTSYTCFFGLLQFLVIALVLERDAQAWLFHSGGEAFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVAIMATIALGEEFYLGGIIGAVLIVGGLYFVLWGKSEEKKFAREQLAIASTTDHSIIRPASHAKASLAQPLLSSSTENV 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01967 392 Pfam EamA-like transporter family 207 345 IPR000620 GO:0016020
Spst8g01967 392 Pfam EamA-like transporter family 26 163 IPR000620 GO:0016020
Spst8g01967 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
Spst8g01967 392 PANTHER WAT1-RELATED PROTEIN 24 358 IPR030184 GO:0016020|GO:0022857
Spst8g01967 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01967 Spst-Chr8 26457260 26460447 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01967 8 26457260 26460447 Spst8g01967 8 26457260 26460447 ECH