Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01964 ATGGTGTCTCTAATTTCGCCACCTGCTTCATCTTCCAACATTCAATTGCGCGATACTCCTTTCTTCTCCACTCTCTTTATTCCGCCAAGGAGCGTCCAATTCCGTCACCACACACGAAACCACCAAAATCACAAACAGAAAACGGTATGGTGTGGCCTTACCAGCACCGGCGCGTCTCCTCCGTCGTCGTTGACGAAGGAGCCTCACAAATTCTTCGACCACGCAATCATCACCGTTCGCGCGGGTGACGGAGGCCACGGTGCGGTGCTGAATCACAAAGAGAAGAACGAGCAGGAGCGGGGGAAAGCGAAGAAGAAAGGGAAAGGCTCGTTGAAGAGGGACTTCGACGGGTCGCTCATACTTCCTACGGGAGGGCACGGAGGGGACGTGGTGATCTACGCCGACGAGGCCAAAGACACGTTGCTGGAGTTTCACACCAAGAGCAGATATCACGCCAAGCGCGGCGGCAACGTTGATGCGATGGGCGCTTTGACGTCGATGTTGCGCGATGGACTTGTGGCGCCCACGCTACGCATTCCTGTCCCTGTAGGTACAGTTGTGAAAAACAAACGAGGGAAGGCGTTGGCTGATCTAGCACAACCCGGTGATGAAGTTCTTGTTGCGAGGGGAGGACAAGGAGGGATTAGCTTGTTAGAAATGCCACAGCGTCAAAGAAAAAAGATGATGGCTCTGACAACTAATGTGATGAGAGATGACTCAGACAAGATTTTAGTTCACGGTCATCCTGGGGAGGAAGTTAAGTTGGAGCTGATCTTACGAGTTGTTGCAGATGTTGGTCTGATTGGACTTCCAAATGCTGGGAAATCAACTCTTCTGGCAGCCATTACACTTGCTAAGCCTGATATAGCTGATTATCCTTTTACAACATTAATGCCAAATCTTGGACGCCTGGGTGGTGATCCCAGCTTGGGGGCAGGAATGTTTTCATCCGAAGCTACATTGGCAGATTTGCCTGGTCTTATTGAAGGTGCTCACTTAGGAAAGGGTCTTGGTCGCAATTTTTTGAGGCACCTCCGGAGGACCCGGCTATTGGTCCATGTTGTGGATGCTGCCACCGAGAATCCTATAAATGATTACAGAACTGTCAGAGAAGAGTTGCGCATGTATAATCCTGAGTACCTTGAACGACCGTACGTTGTAGTTTTGAATAAGATTGACTTACCAGAGGCAAAGGACAGACTCCCATCATTGATTCAAGAAATCATGAGAATAGGCAACGGTGGTGCTACTTCCGAACTAAGATCAAACTCTGAAGTTCCAGCTCAATTGTCTGATGAAACTGACACGAAGGAAAAAAGACTTGAGGAGTATGCTCGACCTCTCTCTGTTGTTGGAGTCAGTGTTCTAAAGGGTATCAGGATTGACACGATGTTAAAGGAGATAAGGTCGGCTTTGAAGAAATGCTCAGATTCTAGTGAAACATTGGCTTCTAGTGTGCCACCTTGA 1467 0.4894 MVSLISPPASSSNIQLRDTPFFSTLFIPPRSVQFRHHTRNHQNHKQKTVWCGLTSTGASPPSSLTKEPHKFFDHAIITVRAGDGGHGAVLNHKEKNEQERGKAKKKGKGSLKRDFDGSLILPTGGHGGDVVIYADEAKDTLLEFHTKSRYHAKRGGNVDAMGALTSMLRDGLVAPTLRIPVPVGTVVKNKRGKALADLAQPGDEVLVARGGQGGISLLEMPQRQRKKMMALTTNVMRDDSDKILVHGHPGEEVKLELILRVVADVGLIGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPSLGAGMFSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAATENPINDYRTVREELRMYNPEYLERPYVVVLNKIDLPEAKDRLPSLIQEIMRIGNGGATSELRSNSEVPAQLSDETDTKEKRLEEYARPLSVVGVSVLKGIRIDTMLKEIRSALKKCSDSSETLASSVPP 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01964 488 Gene3D GTP1/OBG domain 70 261 IPR036726 -
Spst8g01964 488 Gene3D - 262 481 IPR027417 -
Spst8g01964 488 SUPERFAMILY Obg GTP-binding protein N-terminal domain 70 227 IPR036726 -
Spst8g01964 488 PRINTS GTP1/OBG GTP-binding protein family signature 338 356 IPR006073 GO:0005525
Spst8g01964 488 PRINTS GTP1/OBG GTP-binding protein family signature 265 285 IPR006073 GO:0005525
Spst8g01964 488 PRINTS GTP1/OBG GTP-binding protein family signature 321 336 IPR006073 GO:0005525
Spst8g01964 488 PRINTS GTP1/OBG GTP-binding protein family signature 286 304 IPR006073 GO:0005525
Spst8g01964 488 MobiDBLite consensus disorder prediction 88 111 - -
Spst8g01964 488 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 65 470 IPR045086 GO:0003924|GO:0005525
Spst8g01964 488 MobiDBLite consensus disorder prediction 416 438 - -
Spst8g01964 488 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 263 473 IPR031167 GO:0005525
Spst8g01964 488 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 264 474 IPR027417 -
Spst8g01964 488 MobiDBLite consensus disorder prediction 416 430 - -
Spst8g01964 488 Pfam GTP1/OBG 73 260 IPR006169 -
Spst8g01964 488 ProSiteProfiles Obg domain profile. 69 262 IPR006169 -
Spst8g01964 488 CDD Obg 263 408 IPR031167 GO:0005525
Spst8g01964 488 Pfam 50S ribosome-binding GTPase 264 391 IPR006073 GO:0005525
Spst8g01964 488 ProSitePatterns GTP1/OBG family signature. 323 336 IPR006074 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01964 Spst-Chr8 26369830 26375001 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01964 8 26369830 26375001 Spst8g01964 8 26369830 26375001 ECH