Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01962 ATGGCATCATTCCCAATGCCACAGCTTCTGCCATGCACTTCTCTCCCTCAGAGTCACAGTACCAGTACTGCATCGTCGCCGTCCTCTTTGTTCCGCCATCGCCGAAGTCTCCACTCCCTCCGGTGCTCGGCGTCCGAGAAGCCTCCGCCGCACGAGGACGCGGTGGAGCTGCCGCTCTTCCCTCTCCCTCTGGTCCTCTTCCCGGGCGCGATTCTCCCCCTGCAGATCTTCGAGTTCCGGTACCGCATCATGATGCACACGCTCCTTCACACCGATCTCCGCTTCGGCGTCGTCTACCACGACGCCGTTTCCGGCACTTCGGACATCGGCTGCGTGGGCGAGGTGGTGAAGCACGAGTGCCTCGTGGACGACCGCTTCTTCCTGGTGTGCAAAGGCCAGGGGCGGTTCCGCGTGAACGACATCGTCCGCACCAAGCCCTACCTCGTGGGACGCGTGACGTGGCTGGAGGATCGGCCGTCGGAGAGCGACGGCGGAGACGATGCGGAGGAGCTGGCGCGTGAGGTGGAGGGGTACATGAAGGAGGTCATAAGGCTTTCGAACCGTTTGGGGGGGAAGGGGGAGAAGGAGATGGGGGATTTGAGACGGAACCTGTTTCCGACGCCGTTTTCGTTTTTTGTGGGAAGCACGTTCGAGGGGGCGCCGAGGGAGCAGCAGGCGCTGCTGGAGTTGGAGGACACGGCGAAGAGGTTGAAGAGGGAGAAGGAGACGCTGAAGAACACGCTTAACTACCTCACTGCTGCTTCTGCTGTCAAAGATGCTTTTCCTTCTTCTTGA 795 0.6113 MASFPMPQLLPCTSLPQSHSTSTASSPSSLFRHRRSLHSLRCSASEKPPPHEDAVELPLFPLPLVLFPGAILPLQIFEFRYRIMMHTLLHTDLRFGVVYHDAVSGTSDIGCVGEVVKHECLVDDRFFLVCKGQGRFRVNDIVRTKPYLVGRVTWLEDRPSESDGGDDAEELAREVEGYMKEVIRLSNRLGGKGEKEMGDLRRNLFPTPFSFFVGSTFEGAPREQQALLELEDTAKRLKREKETLKNTLNYLTAASAVKDAFPSS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01962 264 SMART lon_5 56 246 IPR003111 -
Spst8g01962 264 Coils Coil 168 188 - -
Spst8g01962 264 Pfam ATP-dependent protease La (LON) substrate-binding domain 56 245 IPR003111 -
Spst8g01962 264 ProSiteProfiles Lon N-terminal domain profile. 57 246 IPR003111 -
Spst8g01962 264 PANTHER ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN 7 263 - -
Spst8g01962 264 MobiDBLite consensus disorder prediction 12 31 - -
Spst8g01962 264 SUPERFAMILY PUA domain-like 56 245 IPR015947 -
Spst8g01962 264 Coils Coil 220 254 - -
Spst8g01962 264 Gene3D - 55 157 IPR046336 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01962 Spst-Chr8 26307415 26308209 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01962 8 26307415 26308209 Spst8g01962 8 26307415 26308209 ECH
Spst8g01962 8 26307415 26308209 Spst9g00332 9 3148917 3149786 PCT