Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01946 ATGGGATCAGCTTGTTGTGTTGCAGCAAAGGATCCTAATCTTCCTAACAGAACTGGAAGTGAAAGCTTGCGTAGAGATGTTGTGTTTTCACCTTCGTGGAGCTTTCAATGGGATAGTCGGGGGCGTGTTGCTGGTGAAGTTGAGAATCCTTCCTATCACACATCTCATGTGGACAGTAGAAATGTCAGCATGGAGTTAAAAGGTTCATTAAGTTCTGAAAGAGGTAATTTGTCTGATGGGGGAAGCATCATGGAAAATTCTGTGACTCCTATTTCTCTGAAGTCCCCTGTTGATGAGGAATTGGTTGCAAATCTGATGACCCCCTCTTCTGATCTGTCCATGTCAAGCAATTTTTCTACAGTGGTGAAGAACCCAGTGGAATCTTCAATACCAAATCTTTCTTTTTCAATACCTTCAGTCTTCTCAACGCCTACAGCAGATCCTTTGCCTAATCACAATTATCACCATCTTCCCAACTCTACCCCAACAAGATGGGCGCATCGGTCTCCAGCACACCCTCTGTTGAGACAGATTTCTGATAGTCGAATAATGGGTCTGAAATCGCCAGACAACTCAATTTCTGAGGGAAGGCCATCATTTGTACTCTCTACTTGCAGCAATGATATGGCTGCTGGATCGCTGTGTGGATCATCTGATGGCTGGTCAATGCGCACCTTCTCTGAGATGGTGGCATCATCCCAAAGGGAAAGGTGGTCTTTTGATAGTGAGTGTTTCAGCTCTGGTAGACACAAAATAAGTGGATCCAGTGGCCGGTTCTCGTATTCTCCCTCCATGGAACTACAATCTTGTGGGGCATGCTCAAAGCTTTTGACTGAAAGATCAACATGGAGCAACCAGAAGTTTCTTCCCAGCAATGACCTCTCAGTTGTTGCTGTTCTGGTGTGTGGTCATGCATATCATGCAGAATGTTTAGAGGCTATGACACCAGAGGCAGATAGGTATGATCCAGCTTGTCCAATTTGTATGGTTGGAGAGAAGCACTTTTCAAAGTTGTCCAGAAAAGTTCTTCGTGCTGAATCAGAGATAAAGGCCAAGAACCACAAGGTATCCAGAAACCGTGTAGTTGATAGCTACCTTGATGGTGGTTTTGACGTTTTTGATCACCAAAAAGATATTGATTTGGGAGGAAAAGTTTCAAAAATGGAGCCTAGCTCCAGTGCGAGGAGTTCATTTGGAAAGCCATTCTTGAGGCGGCACTTTTCACTTGGGTCCAAGTGGAGCCGATCCCTGTCTGAGAATGATTCTGCAAGGAAGAAAGGCTTCTGGGCAAGATATCGTAAAGATTGA 1308 0.4465 MGSACCVAAKDPNLPNRTGSESLRRDVVFSPSWSFQWDSRGRVAGEVENPSYHTSHVDSRNVSMELKGSLSSERGNLSDGGSIMENSVTPISLKSPVDEELVANLMTPSSDLSMSSNFSTVVKNPVESSIPNLSFSIPSVFSTPTADPLPNHNYHHLPNSTPTRWAHRSPAHPLLRQISDSRIMGLKSPDNSISEGRPSFVLSTCSNDMAAGSLCGSSDGWSMRTFSEMVASSQRERWSFDSECFSSGRHKISGSSGRFSYSPSMELQSCGACSKLLTERSTWSNQKFLPSNDLSVVAVLVCGHAYHAECLEAMTPEADRYDPACPICMVGEKHFSKLSRKVLRAESEIKAKNHKVSRNRVVDSYLDGGFDVFDHQKDIDLGGKVSKMEPSSSARSSFGKPFLRRHFSLGSKWSRSLSENDSARKKGFWARYRKD 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01946 435 PANTHER EXPRESSED PROTEIN 1 333 - -
Spst8g01946 435 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 258 330 IPR013083 -
Spst8g01946 435 ProSiteProfiles Zinc finger RING-type profile. 270 328 IPR001841 -
Spst8g01946 435 SMART ring_2 270 328 IPR001841 -
Spst8g01946 435 SUPERFAMILY RING/U-box 269 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01946 Spst-Chr8 25674913 25676991 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01946 8 25674913 25676991 Spst8g01946 8 25674913 25676991 ECH