Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01937 ATGCAAACAGTACGAAGGAAAGAAATGGAAACCTTGGAACTACTTCACATGAACAAAGGCGTAGGCGAAACTAGCTACGCCATGAACTCTTCCGTTCAGAATACAATTATCTCTTGTGGAGAGGCATCAACAAAGAAAGCCATTGTGAAAATTTTGTGCACATGTTGGCCTGAGAGGATGGGCATTGCCGACATGGGTTGTTCCTCCGGACCTAATGCCTTAAGGGTGATTTCGGAGATCGTCGATGGCGTGTACGCCACCACTCGTCTCTTGGACCGGCCACCGCCGGAGTTGGTGGTGTTTATGAACGATCTCTTCACAAATGACTTCAACAACATCTTTGCCTCATTGCCATCTTTCTACAGAAAGCAAAGACAAGAAAAGGGAAGTGGGTTTGGATCATGTTTTGTTTCAGCTGTCCCTGGCACCTTCTATGGTAGGCTTTTTCCAACCAAGACCCTCCACTTTGTGCACTCTTCTTCCAGCCTCCACTGGCTTTCTCAGGTTCCTGGTGGATTAGAGGATGGTAGTGGGAGAGCATTGAACAAAGGAAAGATCTACATTTCAAAGAGCAGTCCTAAGTGCGTGCAGGATGCTTATTCTCAGCAATTCAAGAATGATTTTTCATTGTTTTTGGCTTCTCGTTCCCAAGAAATGGTAACTGGGGGACACATGGTCTTGTCTTTCATGGGCAGAACATCCATGGACCCAACTTCCGACCATTGTTGCTTTCAGTGGGAACTCTTAGCTCGCTCCCTTATGACCATGGTTTCTGAGGGTATTTTGGAAGAGGAAAAGGTGGATTCTTTTGATGCCCCATACTACGCACCATGCATGGAGGAAGTGAAAAAGGAGATTGAAAAGGAAGGGTCATTCATGGTGGAAGAGCACGAAGCTTATGAAATAGAGTGGGATGGAGGAATGGAAATTGAAAGTGATTCTCCAAATGCTCCATCGTTGTCAAGAGGAGAACGAGTTGCGAGGACCATTAGGGCTGTGGTTGAGTCCATGTTGGAATCTCATTTTGGCTCTCACACAATGGATGAGCTTTTCCGCAGGTACTCACAAATTGTGGAAGACCATTTATCCAACACTAGCACCAAGTACATCAATTTGGTCATTTCCCTCGTCAAGCATGCTTGA 1143 0.4576 MQTVRRKEMETLELLHMNKGVGETSYAMNSSVQNTIISCGEASTKKAIVKILCTCWPERMGIADMGCSSGPNALRVISEIVDGVYATTRLLDRPPPELVVFMNDLFTNDFNNIFASLPSFYRKQRQEKGSGFGSCFVSAVPGTFYGRLFPTKTLHFVHSSSSLHWLSQVPGGLEDGSGRALNKGKIYISKSSPKCVQDAYSQQFKNDFSLFLASRSQEMVTGGHMVLSFMGRTSMDPTSDHCCFQWELLARSLMTMVSEGILEEEKVDSFDAPYYAPCMEEVKKEIEKEGSFMVEEHEAYEIEWDGGMEIESDSPNAPSLSRGERVARTIRAVVESMLESHFGSHTMDELFRRYSQIVEDHLSNTSTKYINLVISLVKHA 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01937 380 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 16 365 IPR005299 GO:0008168
Spst8g01937 380 Pfam SAM dependent carboxyl methyltransferase 48 378 IPR005299 GO:0008168
Spst8g01937 380 Gene3D - 15 365 IPR042086 -
Spst8g01937 380 Gene3D Vaccinia Virus protein VP39 29 303 IPR029063 -
Spst8g01937 380 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 9 378 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01937 Spst-Chr8 25105482 25109386 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01937 8 25105482 25109386 Spst8g01937 8 25105482 25109386 ECH