Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01926 ATGGAGTTTGGAGCTGCCACTGCAACTCTCACGAAGAAGCTCTCTAACGGCTACGGCGTCTCCGGAAGATCCGCCTACGACGGCGTTTTTGCGGCTCCGATCAAGCTCCGTGCTCCGACTTTCTCCTCTCAATTCGACGATTACTGCGAGATTTTCGGCACTGCCGGAGCTTCGCTCGGTTCGTCGATTCCGATTCTGGAACTTCCGGAGCTCGAAGAGAGGAAGAAGAAGATCGACGACGTTCGACGCTCGAGGCTCGATTACTCGACTGTCTTCGGAGGGTTCGGGAACCTAGACACTGCCGTGCCTTTCGAGGAGCTAGTGGCCGAGCCAGTAGAGAAAGATAGCTCCACTAGACGGAGTAAGGTCGAAGGAGGACACCAATCTTTCCGGGAAGAGCTTACTACTTGTTCGAAGGAAATTCCAGTGACATCGTGGTCATCCAATGGTGCCAAAAGGGTCAATATGTCATATCATAAAGTTAACCAAGGAAGTGAAAATGGAACTAGTGGGACAACGCATATAGCTCAACTTGGTGCCGTTCCTGCTTACACTCAATTAATTGAAGAAGTCAAGCCGGTGAAGATGAACAGATCTAATAAGTCTGTACCAGTAGCACAGGATACTTATTCTGGTAGTCATGTCGATGAGGGGATAAAAGAAGCTGCACATTCTACTACATCATTTACATGTGCTTCACATGATAATTCTAAGAAACAGTCTTCCAACAATGGAGGAAAAGCTAAAAAGAGATCTGATTCCGTTGATCTGTTTTTTGATGCATGTGAGATCAGCAATGGAAGTAATGGAACACAACATGTCAAAGTTCCTCAATCAGAGACTATAGAAAGCAACTTGAATAATCAAAATGGTGATGCTCTGAAATCAATGCCAATCAAATCCCAGGCATCTAAAAGTAGCTCATTCGAAGGTGTTGGTGCTGATTCTCCACCATACTCAGATGACATGGTACACTCTAATTCAGAGGTAGCTGCTTGTGTAGCTGCTTTAAGAAAGGCGATGGAAGAGGCTCAAGTAAGAATGAAGATTGCGAAAGAACTGATGAGAAGAAAGAAAGAAGGTTTTCCTGATCGTGTCAAACGGAGGTCTAACATTGAATTGAAAGCCGAGGGAAAAAGAGAGGCTAAAGTTACTTATAAAACAATGAAAATTGATACAAAAACAACAATAGGAGAAATGGATACTTTTCCAAATGCTTCTTCTGAGGGAGGGAAGTCAACTATGAGAATAGAAAAAGTGAGGCCAGATCTGGGGGCAAAAGAAACCTGTGGAGCTAAAGAAGCTGTCCGAGAAGCACAGAAGAAAATGAAATCAACTGTAGCAAAACATGAGAAAGAGGTCGAGCAGAAAGAATCAAATCAAAAGAGAAAAATTCTTGAGCTGAAAGAGGCAGAAAATAACAAGAAAGAGCATTACGTCAACAAAACAGATAGGAATACCGCTGAAAAACCAGAAGAATCTGATCAAACAATAGAAATGGTCAAGGAATATTGGGGGCTGGAGAATAATGAAGAGAAGGTCCATGCAGATAATGAAGCATGTGCATGTGAAGAACATGTCCAGGAAAATGGACAAAGGTGTCAAGAAGTAGTAGATGAGACAAAACCGATTCAGGAGGTATTTGAAAATGGATTAATGGACAAAGGTTTGAATGTTAACAAACATGGGGAAGTTGAGAATAGGATTACATCTTTTTATGAACTGGAAGACGGTGAAAGAAATCTTGGTGGGCAATGGTTAATAACAGGAAATGGGAAAAATGTTGCATGTGAGCAAGAAGATGACAACAAATTTGAAGGGTCCTTTGAACCGGAAGAATGCAAAATAAACTTGGGAGCTGTTCAGGAACTGGGAGAGGCTGATAAGAATATCACACCAGAGCCAAAAGGAAGTGAGGGTAGAGTTTCCGTGTCTAGTGAGCTGGAAGAATGTGAATTGACAGAGATTGTGGAGCCACTTGACAATGAGAGTGTGTGCAGTCAACATGCAACAAAGTTGACAACTATGAAGGAAGGCACAGAGAACTTTGGGTGTTCAGAGGATAGAAATGAAAGGAATGGTCCTCTGGATATCAATCAAGAGACTGAACATTCCTGTCAGAGAGAAGCCACTGATAATACCCTTAGCAATGTCTATGTGCAGGAAATACTGGAGGATATTGTGGACCATATTCATACAGAGGAAGAAATTTTTGAAAGAAATACTAAGGAAAGTAAATTTGATGGAAATGGCATGGTTCTAGATGCTGAAGCAAGTGAGAATGGATTTGAAGGAGCCACTCAACTGATGTATGGAAATACAAGGGAAAGGATAGATAACAAAGAGCCAGTTGAAGTTATCAGAGTGATTCAACCCGATCCTTGTTGTGAGGAGGTAAAAGCAGAGGAAGCTGGCAAGACCATAGAAACCAGTTCAAGCTATGAGCCAGATGTAACTGAGAAGTTGAACAAAACTTGGGCAGCTGATGCAATTATTGAAAATGAGGTTACTCTGGAAGTAAATCCAGAGGCTCATTCATGTGATGTGCTAGATGATGATATATCTGTAGCAAGTAGTGCTTCATTTCAACAAGAGAGATATGAAGAAACAGACCCCGATCAGGAGACACATGCTTTCCATGAGAAACATGCAGGTGAGACTTCTTCCTTCATTCGAGTTGCCATTGAACTCAATGAAGCAGACAATCAAATACAAAATATCTTTGAAAGAGAGAACTCTGAAGGTGCTGCTACAAATATTGGTGACACTGATATAAAGGCTAGGCCAAATGTAGATCAGTGCTCAGAAAAGTCAGAAAATTACTGCAATCTGGAAATGCTTGTTGAAGACACAACTCCTGAGTCTGTTGAAATCTGCAAGGATACAAAGGAGATTAAGGTTGCATTAAATGAAGATGTGGATGAGAATCCATGTAACTCCTCTAACGGGGAAAAATTCTATGACAATGAAGACAATATATATGAATCCGAGAAACCTAGGACATCTGATTGGAAATCAAGTCCCTTTAAAGAAAAAAAGAAGGTTGAATCAAGTCACAGCAATAAAAGGGAGAGTAGTCAAGCATCCACAATAGAAGAGAAGGAAGCAAATGACAACTTGCATAAGGAAGAGCAAAAAAGGGAACAGCTCAAAAAACTTGATGAAGCAAAAGAGAGGGAGAAAGAAAGAGGAAAGGAGAAATTAGCCGTAGAAAGAGCAATTCGAGAAGCACGGGAAAGGGCATTTGCTGATGCCAGAGAAAGGGCATCTCTAGAGAGAGCTGCTGCTGAAGCACGCCAGAGAAACATTGCTGATGGACGAGAAAGGCTAGGAAAAACCACTAGTCAGGCAAATGAGAAGACCCCCGCTGAGAAGGCTGCTATGGAGGCAAAACTTAAAGCTGAACGTGCTGCTGTGGAGAGAGCAACTGTAGAAGCACGGGCACGAGCCCTAGAAAGGGCACTCTCTGAGAAAGCTGCCTCTGATGCAAGAAATAAATCTGACAAACCTGTTGCAGGCTTTGGGGCTTCCCGTGATTATGGAATGAAGCAAAACTTCCATTCAAAATCTTTCAGCTATGGTGTTCGTGATTCTACTGATGTATTTGATGGAGCTAATGGTGATTCTGCTCAGAGATGTAAAGCTAGGTTTGAGAGGCACCAGAGAATAGGGGAACGTGTGGTATGGTTCCTGGCACAGGCTCTTGCAGAAAAGAATATGCGTGACCGGCTTGTGCAGAAGGAGCAAGAAGATAGAAATAGGGTAGCAGAAGTTCTTGATGCTGATGTTAAAAGGTGGTCAAGTGGAAAGACAGGAAACTTGAGGGCATTGCTTTCTACATTACAATATATTCTTGGGCCCGATAGTGGTTGGCAACCAATTCCTTTGACAGATGTAGTAACCACCCCAGCTGTAAAGAAAGCTTATCGTAAGGCTACTCTTTTTGTGCATCCTGACAAGCTGCAGCAGCGGGGAGCAAGTATTCAACAAAAGTACATTTGCGAGAAGGTTTTTGATCTTCTAAAGGAAGCTTGGAACAGATTTAACATGGAAGAACGTTAA 4062 0.4232 MEFGAATATLTKKLSNGYGVSGRSAYDGVFAAPIKLRAPTFSSQFDDYCEIFGTAGASLGSSIPILELPELEERKKKIDDVRRSRLDYSTVFGGFGNLDTAVPFEELVAEPVEKDSSTRRSKVEGGHQSFREELTTCSKEIPVTSWSSNGAKRVNMSYHKVNQGSENGTSGTTHIAQLGAVPAYTQLIEEVKPVKMNRSNKSVPVAQDTYSGSHVDEGIKEAAHSTTSFTCASHDNSKKQSSNNGGKAKKRSDSVDLFFDACEISNGSNGTQHVKVPQSETIESNLNNQNGDALKSMPIKSQASKSSSFEGVGADSPPYSDDMVHSNSEVAACVAALRKAMEEAQVRMKIAKELMRRKKEGFPDRVKRRSNIELKAEGKREAKVTYKTMKIDTKTTIGEMDTFPNASSEGGKSTMRIEKVRPDLGAKETCGAKEAVREAQKKMKSTVAKHEKEVEQKESNQKRKILELKEAENNKKEHYVNKTDRNTAEKPEESDQTIEMVKEYWGLENNEEKVHADNEACACEEHVQENGQRCQEVVDETKPIQEVFENGLMDKGLNVNKHGEVENRITSFYELEDGERNLGGQWLITGNGKNVACEQEDDNKFEGSFEPEECKINLGAVQELGEADKNITPEPKGSEGRVSVSSELEECELTEIVEPLDNESVCSQHATKLTTMKEGTENFGCSEDRNERNGPLDINQETEHSCQREATDNTLSNVYVQEILEDIVDHIHTEEEIFERNTKESKFDGNGMVLDAEASENGFEGATQLMYGNTRERIDNKEPVEVIRVIQPDPCCEEVKAEEAGKTIETSSSYEPDVTEKLNKTWAADAIIENEVTLEVNPEAHSCDVLDDDISVASSASFQQERYEETDPDQETHAFHEKHAGETSSFIRVAIELNEADNQIQNIFERENSEGAATNIGDTDIKARPNVDQCSEKSENYCNLEMLVEDTTPESVEICKDTKEIKVALNEDVDENPCNSSNGEKFYDNEDNIYESEKPRTSDWKSSPFKEKKKVESSHSNKRESSQASTIEEKEANDNLHKEEQKREQLKKLDEAKEREKERGKEKLAVERAIREARERAFADARERASLERAAAEARQRNIADGRERLGKTTSQANEKTPAEKAAMEAKLKAERAAVERATVEARARALERALSEKAASDARNKSDKPVAGFGASRDYGMKQNFHSKSFSYGVRDSTDVFDGANGDSAQRCKARFERHQRIGERVVWFLAQALAEKNMRDRLVQKEQEDRNRVAEVLDADVKRWSSGKTGNLRALLSTLQYILGPDSGWQPIPLTDVVTTPAVKKAYRKATLFVHPDKLQQRGASIQQKYICEKVFDLLKEAWNRFNMEER 1353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01926 1353 Coils Coil 1033 1067 - -
Spst8g01926 1353 Coils Coil 334 354 - -
Spst8g01926 1353 MobiDBLite consensus disorder prediction 680 708 - -
Spst8g01926 1353 MobiDBLite consensus disorder prediction 286 322 - -
Spst8g01926 1353 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 22 1353 - -
Spst8g01926 1353 Coils Coil 433 474 - -
Spst8g01926 1353 MobiDBLite consensus disorder prediction 997 1067 - -
Spst8g01926 1353 SUPERFAMILY Chaperone J-domain 1223 1349 IPR036869 -
Spst8g01926 1353 FunFam Auxilin-related protein 1 1220 1353 - -
Spst8g01926 1353 MobiDBLite consensus disorder prediction 229 250 - -
Spst8g01926 1353 MobiDBLite consensus disorder prediction 229 243 - -
Spst8g01926 1353 Coils Coil 1125 1154 - -
Spst8g01926 1353 ProSiteProfiles dnaJ domain profile. 1289 1353 IPR001623 -
Spst8g01926 1353 MobiDBLite consensus disorder prediction 682 708 - -
Spst8g01926 1353 MobiDBLite consensus disorder prediction 286 313 - -
Spst8g01926 1353 MobiDBLite consensus disorder prediction 1096 1124 - -
Spst8g01926 1353 CDD DnaJ 1301 1346 IPR001623 -
Spst8g01926 1353 Gene3D DnaJ domain 1229 1353 IPR036869 -
Spst8g01926 1353 MobiDBLite consensus disorder prediction 1096 1114 - -
Spst8g01926 1353 MobiDBLite consensus disorder prediction 442 496 - -
Spst8g01926 1353 MobiDBLite consensus disorder prediction 1155 1179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01926 Spst-Chr8 24790959 24797093 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01926 8 24790959 24797093 Spst8g01926 8 24790959 24797093 ECH
Spst8g01926 8 24790959 24797093 Spst9g00392 9 3466533 3474972 PCT