Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01924 ATGTTCCGAAACCAGTACGACACGGACGTGACGACATGGAGTCCTGCGGGGCGGTTGTTTCAGGTGGAGTACGCAATGGAGGCGGTGAAGCAGGGCTCGGCTGCGATCGGTCTCCGATCCAAGACGCATGTGGTTCTCGCATGCGTCAACAAGGCCAACTCCGAACTCTCTTCGCACCAGAAGAAGATCTTCAAGGTCGACAACCACATCGGCGTTGCCATCGCCGGCCTCACCGCCGACGGCCGCGTCCTCTCCCGCTACATGCGATCCGAATGTATCAATTATAATTACACCTACGAGTCTCCTCTCCCCATTGGCAGACTCGTCGTTCAGCTCGCCGACAAGGCACAGGTTTGCACTCAGCGGTCATGGAAACGTCCTTATGGGGTTGGTCTCCTGGTAGCTGGATTAGATGAATCGGGAGCTCACCTCTACTACAACTGTCCCAGTGGAAACTATTTTGAATATCAGGCTTTTGCTATTGGGTCTCGCTCTCAAGCTGCAAAGACATATTTGGAACGCAGGTTTGATAACTTCATGGGTTCTTCCCGAGAAGATCTAATCAAAGATGCACTTATTGCAACTAGGGAGTCCTTGCAAGGTGAAAAACTGAGGAGTTCTGTATGCACTATTGCTGTGGTTGGAGTTGGTGAGCCATTCCACATTTTAGATCAGGAAACTGTTCAACAGTTGATTGATACTTTTGAGATTGTGAAGGAGGAAGAACCTCCAGCTGAAGAAGCTCAGCCAGCATCCGAGCAGGATGCTCCCACAGACCAGACTTCTGGTGCAGATCAAGGTGCTGCTGCTGGAGACCAAGGTGGTTCTCCTATGGAAATTTGA 843 0.5113 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQKKIFKVDNHIGVAIAGLTADGRVLSRYMRSECINYNYTYESPLPIGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFDNFMGSSREDLIKDALIATRESLQGEKLRSSVCTIAVVGVGEPFHILDQETVQQLIDTFEIVKEEEPPAEEAQPASEQDAPTDQTSGADQGAAAGDQGGSPMEI 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01924 280 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 10 239 - -
Spst8g01924 280 ProSitePatterns Proteasome alpha-type subunits signature. 6 28 IPR000426 GO:0006511|GO:0019773
Spst8g01924 280 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 232 IPR029055 -
Spst8g01924 280 ProSiteProfiles Proteasome alpha-type subunit profile. 21 232 IPR023332 -
Spst8g01924 280 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 235 IPR029055 -
Spst8g01924 280 SMART Proteasome_A_N_2 6 28 IPR000426 GO:0006511|GO:0019773
Spst8g01924 280 Pfam Proteasome subunit 29 214 IPR001353 GO:0005839|GO:0051603
Spst8g01924 280 CDD proteasome_alpha_type_1 6 215 IPR035144 GO:0019773
Spst8g01924 280 FunFam Proteasome subunit alpha type-6 2 232 - -
Spst8g01924 280 MobiDBLite consensus disorder prediction 253 267 - -
Spst8g01924 280 MobiDBLite consensus disorder prediction 239 280 - -
Spst8g01924 280 Pfam Proteasome subunit A N-terminal signature 6 28 IPR000426 GO:0006511|GO:0019773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01924 Spst-Chr8 24698115 24700873 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01924 8 24698115 24700873 Spst8g01924 8 24698115 24700873 ECH