Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01909 ATGGCCTCAGGCTCAGTTTGGACAACAAAGCAGAACAAGAAGTTTGAGAATGCTTTGGCCATCTACGACAAGGACACCCCAGATCGGTGGCAGAAATTGGCCAGGGCAGTGGGAGGAAAAACAGTGGAGGAAGTGAAAAGGCACTATGAGATGCTCGTTGATGATTTGAGGAAGATTGAAGAAGGTCACGTGCCCTTGCCCAATTACAGACAAGTTGCTGCAGCAGAAGGAGGCAGCATCAGAGGTTACAGTTACACGAACGAAGAACAAAGGATGAAGGTTCTAAGCCTCCAGTGA 297 0.4848 MASGSVWTTKQNKKFENALAIYDKDTPDRWQKLARAVGGKTVEEVKRHYEMLVDDLRKIEEGHVPLPNYRQVAAAEGGSIRGYSYTNEEQRMKVLSLQ 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01909 98 SUPERFAMILY Homeodomain-like 5 61 IPR009057 -
Spst8g01909 98 Gene3D - 1 66 - -
Spst8g01909 98 Pfam Myb-like DNA-binding domain 6 52 IPR001005 -
Spst8g01909 98 FunFam Transcription factor SRM1 1 66 - -
Spst8g01909 98 CDD SANT 7 53 IPR001005 -
Spst8g01909 98 ProSiteProfiles SANT domain profile. 2 62 IPR017884 -
Spst8g01909 98 SMART sant 3 55 IPR001005 -
Spst8g01909 98 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 5 75 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01909 Spst-Chr8 24299339 24299918 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Spst8g01909 Myb_DNA-binding 1.7e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01909 8 24299339 24299918 Spst8g01909 8 24299339 24299918 ECH
Spst8g01909 8 24299339 24299918 Spst9g00373 9 3357171 3357623 PCT