Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Spst8g01893 | ATGGCTGAACAACGCGCCACCTCCGATACTCGCCTCCACCTCTCCGTTGCACCGCCATTGCAGATCTCCAAAGATGTCCAAGGATCTGACAATCCCATTCCGCTCTCACCTCAGTGGCTTCTGCCAAGGCCGGGGGAGAGTAAACTTGGATCAGGATCTGTGGAGAACCACATGATCTCAAATCCAACATATGGCTATCGCTCAGAGACTGTTAAGACATCTGGAAATGGAGAGGATGTGCATGATGTCCATAAGAAAAAAGATGTCTTTAGGCCATCCATGTTTGACACAGAAGGTGGGCGTCGTGACCGTTGGCGTGATGAGGAGAGAGACACCAAGTCCTCCATCAGGAAGGATAGATGGAGGGATGGGGACAAAGAGCTAGGTGATTCTCGCAGAGTGGATCGATGGACAGATAATTTATCTGCAAAGAACTTTGCAGAAGTACGGCGTGGTGCATCTGATAATCATAGGTGGAGTGATTCAGGAAACAGAGAAACTAACTTTGATCAGCGGCGTGAAAGTAAATGGAACACCCGCTGGGGTCCTGATGACAAGGAACCGGAAGGTGTCCGTGAAAAATGGAGTGACACCGGGAAAGATGGTGATATACATTTGGAAAAAGGTCTGTCTAACATTTCCAGTCAGGGAAAGGATGAGAAGGAGGGAGATCATTACCGGCCATGGAGACCTAACTATTCACAAAGCCGAGGAAGGGTAGATCCTTCCCATACAACCCCAAGCAAACCAATCTCTACATTTTCCTATGGGCGTGGCCGTGGGGAGAATACACCCCCAGTCTCTACTATTGGACATGGCCGGGCTGGTTCTCTTGGTAGCACTTTGAGTACATACCCTGGAACTGCATTGGAGAAAGTTGAAAGTGGGCATGAAGAACCTAGCCGCTTCAGATATAACAGGACAAAATTGCTTGATGTGTACAGAGTTACTGGTATGGGTACAAATAGAAAACTAGTTGATGATTTTGTGCAGGTAACTAATCTTACTCAGGATGAACCGTTGGAGCCTCTAGCTATTCTGGCACCAAATTCTGAGGAACTGAGTGTCCTAAAGGGTATTGACAAAGGGGAGATAATAAGCAGCGGTGCACCTCAGGTGCCAAAAGATGGAAGGAGTTCGACAGATTTTACTCATACAAGAAGAACGAAGTCTGGAAGTGCACCTTTTCAAGATAGAGGTGAAGATGGAAGTTCTTACAAAGTGCCTGAAGAGGGGCCAAGTAATAGAGATTCAACTTTTGAAGGAAATACTTCTGTTCATGCTGGTGCCCCATGGCGAACAATGTCGCATGGTGATCATGCTAACCAGTTTCACAATAGCAGAGATGTAACTAGTGATGTTAGATTGAGAAAAACAGATATTGGTTCACACCAGCCGAAAGATCCTCATAATGAGTGCATCACAGAGAGTTTAGGTTATAAATCTACCTCCAAAGAAGTAGGTAAGTGGCAAGCTAGTGAAGATCCTGTTATTAAGAGGCAGTTGTCTGGCATTTTGGACAGTGAACTTGAAACCAGAAGAGGTCAACAGACTGTTCCAGAGGAGTTATCCCTTTTGTATAAAGATCCTAAGGGTCTAATCCAAGGCCCATTTAAAGGAATTGATATTATTGGATGGTTTGAAGCTGGATATTTTGGTATTGATTTACCTGTTCGTCTGGAAAATGCAGTGGCCGACTCACCATGGTTGTCTCTTGGTGATGTCATGCCCCATTTACGGGCCAAAGCCCGACCACCACCTGGGTTTACTGCACCAAAACCAAATGACTTTACAGATATTTCTGTCAGGCAAATTTCCGGTACATTTGGGAATACTCTTGCTGGTTTGAATGAGGTTGACATTTTGAGAAATGATTCTATGCATAGGCAGAATCCTGATACAGAAGCTGAAAATAGGTTTCTGGAGTCACTTATGTCTGGTAGCAAGAACAGTCCTCCCCTTGATAGCCTGACGTTGTCAGAAGGTCTACAAGGGTTTGTTGGAAATAATCCAGGTAATATGGGTCCATCAGGAGTTGATAATGGAAATAATCTTTACTTGCTTGCCAAGAGGATGGCACTTGAACGACAGCGGTCCATACCTAGTCACTACCCATATTGGCCAGGACGTGATGCAGCTTCATTTGCTCCAAAACCGGATGTTGTCCCAGATGCCTCCTTGCATTCTAAACTATTGTCTTCAGTGAGTGATAACTCTCGTCAACCTCAGTCCCAAAGTTCCGAGTTAATGTCACTCATCCAAGGTTTATCTGATAGGACATCTGCAGGCCTAAATAATGGTCCTGCTGGCTGGCCTAATTATCCTTTACAAGGTGCATTAGATCCCCTACAGAATAAAATTGACTTGCTTCATGATCAAAATTATCCTCAAATGCCATTTGGAATTCAGCAGCAAAGGCCATCGGCACAAAACCAACTGTCTTTAAGCAATTTACTGGCTCAAGCTGCTGATAACCCATCTAATGCTTTGGCAGCAGAGAAGCTACTTTCTTCTGGTTTATCACAAGATCCGCAAATATTAAATATGTTGCAACAGCAATACTTGTTGCAACTGCATTCTCAGGCAGCTGCTCAAGCACAGCAGATCCCCTTGATTGATAAACTCCTGTTGCTGAAGCAACAACAGAAGCAGGAGGAGCAGCAGCAATTACTGCGACAACAGCAATTGCTTTCTCAAGTGTTGCAAGACCAACAGTCTAGCCAGCTTTTCAGCAATTCATCTTATGGACAGTTGCAAGGTGTATTGCCCATGGGGAATTTGCGTGTGGAACCTTCTCAACTTCAATCACCCCAAGAGATCTTTCCCATGAGCTCTCAGGCACCAATCCCCAATGTGCATAATGAGCACAATTCCAGTTCTTTGAATCTACCACCGAAAGCTAGTCAAGATACAAATTGTAATGTAAGCAGTGAAGCTTCTATACGTCTGCCTCACCAATTATATGGGGATACTGGTCGTCCAGATAATTGGGTCCCTAATCTTACTGAACAGATTAATGATAAATATCTGAAGGAATCATTGCCGATATCATCAACTTATATTGAGAGTTCTACATTGCTTGATCAGAACAGATCCAAAGAAGAACCATTCATTGTGCAAGAACCTCCTTCTCTTAAAGATTTCACTTCCAAGTCAGTAGAACAGGTGCCGCCCAGCAACTTTAGGCCTGATGGTGTGGTTGTGACCTCGATTTCTAAGCCTGGTGAAAATTATGGACTTCTGCAGTCTTTTGCACCTAACATTGCCTTAACTTCAGCTGGATCTAATGGGTTTGAATCTCCACTTCTGAGTGACCCTGGTATGGAGGTGAAGACCAAATTGGATATTGTGCATCAAGAGCAACATGCTGGGAGGGACGGCTCTGTATCTGAGCAATCTCTGGGAGACATAAGAAACATTGAAGTTCATGAACCTAAAAAGGCTAGTGAGAAAAAATCTAAGAAACAAAAATCAACCAAGTCTCAGTCTTTTGATCAAACAAAGGGAGTGGTAAAAAATGTGACTTTGCAGCCATCAAAGCAGTCAGAAGCTGAAATGCCAAAATCAAGTGATTTTGGGGAACCTAAGAGGGTTAAATCATTGGATGAAACAAATATGCAACAAACCAGAGTTAAAGGAACTCAGACTGGAGGTGCAGTCCCAGAGGCAGGTGATCACCATCGTGCTGGTGGCTGGACTGGTATTGTTACTGGAAAGATAACTGAAACAGTTGATATAGGTGATGCCAAGGAAGCTAGTTCTATTTTGACACAGAAAACTGAAGTACCTGCTGGACGAGCTTGGAAACCTGCTCCTGGTGTTAAACCAAAATCTTTCTTAGAAATTCAACAGGAAGAACAGAGGAAGGCAGATACAGAAATGCTTGTATCTGACATTGCTGTTTCTGTCAATTCAATGAGCCTGGCAAGTCCCTGGGCTGGAGTTGTGTCCAATCCAGACTCTGTGAAGGTATCTAGTGAAAGTCACAAAGAAGGAGGCAATACTGAAAATTTTGTTAAATCTGAAATTTCTCAACATGTCAAAAGCAAGAAAAGTCCTCTACATGATCTATTAGCAGAAGAAGTTCTAAAGAAATCTAATGAATTAGATGTTGAGGTTCCAGATAGTATATTGCCCTCACATAATATAGTTGTGCAATTAGAATCACTGGATGATGGCCATTTTATTGAGGCAAAAGATACTAAAAGAAGCCGAAAAAAGACTGCAAAATCAAAGGGTTCTGGAACTAAAGCTTCATTGCCCATTGCATCTTCTGATGTACCTGTAGCTTCAAGCCCCAATGAAAAGGGAAAAAACTCGCGTTTGGTACAGCAGGAGAAAGAAGAATTGCCTGTTATCCCTGCAGGACCCTCTCTGGGTGATTTTGTTCTTTGGAAAGGAGATCGAGAACCATCAAGCACCTCTCCTTCTCCAGCATGGTCTACTGATTCTGGTAGAGTTCCAAAACCAACTTCATTGAGGGACATTCTTAAGGAGCAAGAGAAAAAGGCCTCTTCTGCAATTCCTGTAAGCCCAATGCCTCCCCCTCAGAAATCTCAGCCTACCCAGTCTACACGTAGTAGTCTATCTTCATGGTCAGTTTCGGCATCCTCTCCATCTAAAGCTGCTTCGCCAATTCAGATAAATACCCAAGCTTCTCAATCAAAATACAAGGGAGATGATGACTTGTTCTGGGGTCCAATAGAGCAATCTAAGCAGGATGCCAAGCAGTCGGATTTCCCACAGCTTGCGGGCCAAGGGAGCTGGGGTACGAAAAATGTACCGTTGAAAGGTAATTCTCCTGGACTATTGACAAAACAGAAATCAGTGACAGGAAAACCAACTGAACGGTCTCTAGCATCATCACCTGCCTCTTCTCAATCAATGCTGAAATTGAAAAAAGATGCCATGACAAGGCATTCTGAGGCCACGGACTTCAGAGATTGGTGTGAGAACGAGTGTGTTAGGCTTATTGGGACAAAAGTGTTTATTTTTTGTGGGACGGGCGTTGTGTTTATTGCAGATACAAGTTTCCTTGAATTTTGCTTGAAGCAATCCAGATCGGAAGCTGAGATACTTCTTATAGAAAACCTTGGATCCTATGATCCCGACCACAAATTCATTGATAAATTCCTGAATTGCAAGGAGCTGTTACCGTCAGATGTTTTGGACATTGCTTTTCAGAATAGGAATGACAAGAAAGTTACTGGACATGGACCAGCTGAGACAGGTTTAGCTAATGCAGATATTCAGGATGTGGAGTGCACTGAAGGATCCTCTAAAGGTGGTGGAAAGAAGAAAGGTAAGAAGGGGAAAAAGGTCAGCCCTTCAGTTTTGGGATTTAACGTTGTGAGTAACCGGATCATGATGGGGGAGATCCAGAATGTAGAAGATTAA | 5397 | 0.4356 | MAEQRATSDTRLHLSVAPPLQISKDVQGSDNPIPLSPQWLLPRPGESKLGSGSVENHMISNPTYGYRSETVKTSGNGEDVHDVHKKKDVFRPSMFDTEGGRRDRWRDEERDTKSSIRKDRWRDGDKELGDSRRVDRWTDNLSAKNFAEVRRGASDNHRWSDSGNRETNFDQRRESKWNTRWGPDDKEPEGVREKWSDTGKDGDIHLEKGLSNISSQGKDEKEGDHYRPWRPNYSQSRGRVDPSHTTPSKPISTFSYGRGRGENTPPVSTIGHGRAGSLGSTLSTYPGTALEKVESGHEEPSRFRYNRTKLLDVYRVTGMGTNRKLVDDFVQVTNLTQDEPLEPLAILAPNSEELSVLKGIDKGEIISSGAPQVPKDGRSSTDFTHTRRTKSGSAPFQDRGEDGSSYKVPEEGPSNRDSTFEGNTSVHAGAPWRTMSHGDHANQFHNSRDVTSDVRLRKTDIGSHQPKDPHNECITESLGYKSTSKEVGKWQASEDPVIKRQLSGILDSELETRRGQQTVPEELSLLYKDPKGLIQGPFKGIDIIGWFEAGYFGIDLPVRLENAVADSPWLSLGDVMPHLRAKARPPPGFTAPKPNDFTDISVRQISGTFGNTLAGLNEVDILRNDSMHRQNPDTEAENRFLESLMSGSKNSPPLDSLTLSEGLQGFVGNNPGNMGPSGVDNGNNLYLLAKRMALERQRSIPSHYPYWPGRDAASFAPKPDVVPDASLHSKLLSSVSDNSRQPQSQSSELMSLIQGLSDRTSAGLNNGPAGWPNYPLQGALDPLQNKIDLLHDQNYPQMPFGIQQQRPSAQNQLSLSNLLAQAADNPSNALAAEKLLSSGLSQDPQILNMLQQQYLLQLHSQAAAQAQQIPLIDKLLLLKQQQKQEEQQQLLRQQQLLSQVLQDQQSSQLFSNSSYGQLQGVLPMGNLRVEPSQLQSPQEIFPMSSQAPIPNVHNEHNSSSLNLPPKASQDTNCNVSSEASIRLPHQLYGDTGRPDNWVPNLTEQINDKYLKESLPISSTYIESSTLLDQNRSKEEPFIVQEPPSLKDFTSKSVEQVPPSNFRPDGVVVTSISKPGENYGLLQSFAPNIALTSAGSNGFESPLLSDPGMEVKTKLDIVHQEQHAGRDGSVSEQSLGDIRNIEVHEPKKASEKKSKKQKSTKSQSFDQTKGVVKNVTLQPSKQSEAEMPKSSDFGEPKRVKSLDETNMQQTRVKGTQTGGAVPEAGDHHRAGGWTGIVTGKITETVDIGDAKEASSILTQKTEVPAGRAWKPAPGVKPKSFLEIQQEEQRKADTEMLVSDIAVSVNSMSLASPWAGVVSNPDSVKVSSESHKEGGNTENFVKSEISQHVKSKKSPLHDLLAEEVLKKSNELDVEVPDSILPSHNIVVQLESLDDGHFIEAKDTKRSRKKTAKSKGSGTKASLPIASSDVPVASSPNEKGKNSRLVQQEKEELPVIPAGPSLGDFVLWKGDREPSSTSPSPAWSTDSGRVPKPTSLRDILKEQEKKASSAIPVSPMPPPQKSQPTQSTRSSLSSWSVSASSPSKAASPIQINTQASQSKYKGDDDLFWGPIEQSKQDAKQSDFPQLAGQGSWGTKNVPLKGNSPGLLTKQKSVTGKPTERSLASSPASSQSMLKLKKDAMTRHSEATDFRDWCENECVRLIGTKVFIFCGTGVVFIADTSFLEFCLKQSRSEAEILLIENLGSYDPDHKFIDKFLNCKELLPSDVLDIAFQNRNDKKVTGHGPAETGLANADIQDVECTEGSSKGGGKKKGKKGKKVSPSVLGFNVVSNRIMMGEIQNVED | 1798 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Spst8g01893 | 1798 | MobiDBLite | consensus disorder prediction | 1187 | 1203 | - | - | |
| Spst8g01893 | 1798 | MobiDBLite | consensus disorder prediction | 1413 | 1439 | - | - | |
| Spst8g01893 | 1798 | MobiDBLite | consensus disorder prediction | 214 | 228 | - | - | |
| Spst8g01893 | 1798 | MobiDBLite | consensus disorder prediction | 366 | 453 | - | - | |
| Spst8g01893 | 1798 | MobiDBLite | consensus disorder prediction | 236 | 259 | - | - | |
| Spst8g01893 | 1798 | PANTHER | GYF DOMAIN-CONTAINING PROTEIN | 1 | 1798 | - | - | |
| Spst8g01893 | 1798 | MobiDBLite | consensus disorder prediction | 1137 | 1161 | - | - | |
| Spst8g01893 | 1798 | MobiDBLite | consensus disorder prediction | 1755 | 1775 | - | - | |
| Spst8g01893 | 1798 | MobiDBLite | consensus disorder prediction | 1162 | 1186 | - | - | |
| Spst8g01893 | 1798 | MobiDBLite | consensus disorder prediction | 150 | 207 | - | - | |
| Spst8g01893 | 1798 | MobiDBLite | consensus disorder prediction | 74 | 139 | - | - | |
| Spst8g01893 | 1798 | ProSiteProfiles | GYF domain profile. | 522 | 573 | IPR003169 | GO:0005515 | |
| Spst8g01893 | 1798 | MobiDBLite | consensus disorder prediction | 53 | 73 | - | - | |
| Spst8g01893 | 1798 | MobiDBLite | consensus disorder prediction | 1470 | 1488 | - | - | |
| Spst8g01893 | 1798 | MobiDBLite | consensus disorder prediction | 1119 | 1232 | - | - | |
| Spst8g01893 | 1798 | MobiDBLite | consensus disorder prediction | 1397 | 1633 | - | - | |
| Spst8g01893 | 1798 | CDD | GYF | 522 | 579 | IPR003169 | GO:0005515 | |
| Spst8g01893 | 1798 | SUPERFAMILY | GYF domain | 516 | 579 | IPR035445 | - | |
| Spst8g01893 | 1798 | MobiDBLite | consensus disorder prediction | 952 | 972 | - | - | |
| Spst8g01893 | 1798 | MobiDBLite | consensus disorder prediction | 1571 | 1632 | - | - | |
| Spst8g01893 | 1798 | MobiDBLite | consensus disorder prediction | 1 | 263 | - | - | |
| Spst8g01893 | 1798 | MobiDBLite | consensus disorder prediction | 1520 | 1557 | - | - | |
| Spst8g01893 | 1798 | MobiDBLite | consensus disorder prediction | 1036 | 1057 | - | - | |
| Spst8g01893 | 1798 | Pfam | GYF domain | 527 | 571 | IPR003169 | GO:0005515 | |
| Spst8g01893 | 1798 | Gene3D | - | 511 | 589 | IPR035445 | - | |
| Spst8g01893 | 1798 | SMART | gyf_5 | 523 | 578 | IPR003169 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Spst8g01893 | Spst-Chr8 | 23790533 | 23798888 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Spst8g01893 | 8 | 23790533 | 23798888 | Spst8g01893 | 8 | 23790533 | 23798888 | ECH | |
| Spst8g01893 | 8 | 23790533 | 23798888 | Spst9g00384 | 9 | 3412173 | 3421059 | PCT |