Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00653 ATGATTCATTTTGTGCTTCTTATCAGTCGACAAGGAAAAGTGAGGCTCACAAAATGGTATTCACCATACTCTCAAAAGGAGAGATCCAAGGTAATTAAAGAGTTATGTGGGGAAATTATCTGTAGAGGCCCGAAGCTATGCAACTTTGTGGAGTGGAAGGGATTCAAAGTTGTATATAAAAGATATGCCAGTCTCTACTTCTGCATCTGCAATGACCAGGAAGACAATGAATTGGAGACCCTGGCCATTATTCATCATTTTGTTGAGACACTGGATCGCTATTTTGGCAGTGTTTGTGAACTGGATTTAATCTTCAATTTTCACAAGGCATATTATATATTGGATGAAATTCTACTAGCTGGAGCCATGCAGGAAACTAGCAAGAGAACAACTCTGAGACTGATAGGTGCACAGGAGGATTTGGTGGAAGCTGCGAAAGAGGAATCAAGTTCATTGAGTAATATAATCGCCCATGCCACCAAAGACTTGATCTATCTTGAAGCTGTTTTTTTCTGGGAAAAGATGATGATGTTCGAAGACATTGGGTTTTGTGGTGATTTGGATTTGTTAAGTTGTCCCCTTGGAGAGGAGGACGTTGCTGTGAGACAAACAGAACAAGATCCTGTGGTTGACGATGATTACAGTGATGAAGAGATTGATATGGAGGAGCTCGAGAAACGTATATGGAGGGACAAAGTGCGCTACAAGCGAATGAAAGAACAAACCAAGGTCAAGGAAGGGACTGATGCAGTGAAACAAAGGCAATCCCAAGAGCAAGCTAGGAGGAAAAAGATGTCAAGAGCTCAGGATGGAATACTGAAGTACATGCTGAAAATGATGGAGGTTTGCAAGGCACAAGGGTTTGTTTATGGGATCATTCCTGAAAAAGGGAAGCCAGTGACTGGAGCATCGGACAATCTTCGCGAATGGTGGAAGGACAAGGTCAGGTTTGATCGGAATGGTCCTGCTGCCATAGCAAAGTATCAGACTGATAATGCAATTCCAGGAAAGAATGATGGTTGTAATTCGATTGGTCCAACTCCACACACATTGCAGGAGTTACAAGACACAACATTGGGTTCTCTTCTGTCAGCACTTATGCAGCACTGTGATCCTCCTCAGAGAAGGTTCCCTCTAGAGAAGGGTGTTCCTCCGCCATGGTGGCCCACTGGGAATGAAGAATGGTGGCCTCAAATTGGTCTCCCCAAAAATCAAGGCCCGCCACCTTACAAGAAACCTCATGACCTCAAGAAAGCATGGAAGGTTGGTGTTCTTACTGCTGTCATCAAGCACATGTCACCTGATATAGCCAAGATTCGAAAGCTTGTAAGACAGTCTAAATGCCTTCAGGACAAAATGACAGCGAAGGAGAGTGCAACATGGCTTGCCATCATCAACCAAGAGGAAGCCTTGGCCCGAGAGCTTTATCCTGACTATTGTCCACCATTTTCATCTGGTGGAGGTAATGGCTCCATGGTCATCAATGATTGCAGCGAGTATGATGTTGACGGGGCAGAGGAGGAATCAAACTTTGATGTAGAGGACCGGAAGCCTGACCATCTTCATCCATCTAATCTTGGAATGGAGAGAATCACAGGAAGACTACCACCACAACAAATTTCTCATCCATTTAAGGGAGATGTTGTCACAAACCTTGATTTCATCCGGAAGAGGAAGATTCCTGGTGAATTCAACCTCATTATGGATCAGAAAATCTACACTTGCGAGCATCCTCAATGTCCTTACAATGAACCTCGCCTTGGTTTCCATGACAGGTCGGCTAGGGACAATCATCAATTGAATTGTGCATACAGAAACAGTGCTGCAGAGTACGGTGGTGGTTCCAATTTCCATGCTGCTGAGGTTAAGCCAGTCGTATTCCCTCAGTCATTTGTTCAACCCAGCACTACATCCCAGACTGCAAGTGTGGTTCAACCTTCATTTGGTGTAACTGGGCTTGGAGTTCCAGAGGATGGCCAAAAAATGATAAATGACCTCATGGCAGTCTACGATACAAATGTTGCAGGACATCATAACTTACGGTCCAACAACTTTGTAACTTCAGAAAATCGTAACTTTTCTCAGACCATGTTACAGCAACAACAGGACAGTCATGACAATTTTTTCACTGACCAAGGAATGGTGATGGAAGGGAACTTCTTTGCGCGGGAGGAAGGTCAATTTGAGAGGTTCAAGGGCATGAACATGAATGCCCCTTTTGATACCAACCACGTGATGTTTAGCCCCCAGTGTGATTTGTCATCTTTTGATTTTAAGGATATCCAAGGGGTAGGAATGGATACCATTCACAAACAGCAAGAGGTTTCAATTTGGTTCCAGTGA 2343 0.4396 MIHFVLLISRQGKVRLTKWYSPYSQKERSKVIKELCGEIICRGPKLCNFVEWKGFKVVYKRYASLYFCICNDQEDNELETLAIIHHFVETLDRYFGSVCELDLIFNFHKAYYILDEILLAGAMQETSKRTTLRLIGAQEDLVEAAKEESSSLSNIIAHATKDLIYLEAVFFWEKMMMFEDIGFCGDLDLLSCPLGEEDVAVRQTEQDPVVDDDYSDEEIDMEELEKRIWRDKVRYKRMKEQTKVKEGTDAVKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQTDNAIPGKNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGNEEWWPQIGLPKNQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYCPPFSSGGGNGSMVINDCSEYDVDGAEEESNFDVEDRKPDHLHPSNLGMERITGRLPPQQISHPFKGDVVTNLDFIRKRKIPGEFNLIMDQKIYTCEHPQCPYNEPRLGFHDRSARDNHQLNCAYRNSAAEYGGGSNFHAAEVKPVVFPQSFVQPSTTSQTASVVQPSFGVTGLGVPEDGQKMINDLMAVYDTNVAGHHNLRSNNFVTSENRNFSQTMLQQQQDSHDNFFTDQGMVMEGNFFAREEGQFERFKGMNMNAPFDTNHVMFSPQCDLSSFDFKDIQGVGMDTIHKQQEVSIWFQ 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00653 780 Pfam Ethylene insensitive 3 222 469 IPR047091 GO:0003700
Spst8g00653 780 Gene3D - 1 157 - -
Spst8g00653 780 Gene3D - 254 331 IPR023278 GO:0003700|GO:0005634
Spst8g00653 780 MobiDBLite consensus disorder prediction 508 530 - -
Spst8g00653 780 FunFam Ethylene insensitive 3-like 1 254 332 - -
Spst8g00653 780 FunFam Ethylene insensitive 3-like 1 342 479 - -
Spst8g00653 780 ProSitePatterns Clathrin adaptor complexes small chain signature. 57 67 IPR000804 GO:0006886|GO:0016192|GO:0030117
Spst8g00653 780 SUPERFAMILY DNA-binding domain of EIN3-like 348 472 IPR023278 GO:0003700|GO:0005634
Spst8g00653 780 Gene3D - 346 479 IPR023278 GO:0003700|GO:0005634
Spst8g00653 780 MobiDBLite consensus disorder prediction 510 524 - -
Spst8g00653 780 MobiDBLite consensus disorder prediction 244 265 - -
Spst8g00653 780 Pfam Clathrin adaptor complex small chain 1 135 IPR022775 -
Spst8g00653 780 FunFam AP complex subunit sigma 1 154 - -
Spst8g00653 780 CDD AP1_sigma 3 145 IPR044733 GO:0016192|GO:0030121|GO:0035615
Spst8g00653 780 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 203 732 IPR006957 GO:0003700|GO:0005634
Spst8g00653 780 Coils Coil 221 241 - -
Spst8g00653 780 SUPERFAMILY SNARE-like 1 137 IPR011012 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00653 Spst-Chr8 6043467 6051483 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00653 176 779 EIL Transcription Factor Family AT3G20770 58.462 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Spst8g00653 EIN3 1.3e-128 No_clan