Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00312 ATGAAGAGGGAAAGAATGGAAAACGCGAATGCAGTGAGAGGTGAATGTGCTAGCAGTGGGGAGGAGAAGAAGATGTTTGAGGAAGAAGAAAATGAAGACAAGTTGTTGGCAGGTGCAGGATACAAAGTGTGTCCCTCGGACATGGCTGACGTTGCACACAAGCTGCAGCAATTGGAGATGGTGATGGAGGAAGATGGAATTTCCCATCTCGCCACCAACACCGTGCATTACGACCCAACCGATCTCTACGGTTGGGTTCAGAACATTCTCAACAACGCACCCAATTACACCTCCACCATCTCCACAAACATCAACAACAACTCTTTTACTCCATCGCCGTTAATCAACGTCCCTGAGAACGATCCAAGAGCGATTCCATTGCCATACATCGAAGCGTATCCACAAATAGAAAATCAAAATTGCCTCAAGCGATTCAAGAGTTCTTCATTTCCGTGTTCGCCGGCGATTTCATCGGGGAACGCGCTTCCGGTGGTTATGGTGGAGGAACCCGGCGTGCATCTCGTCCATGCACTCATGGCATGCGCGGAGGCTGTTCAATTAGGAAACGCGAGCCTCGCGGTGGGCCTCGTGAAGCACGCGGGAACCCTCGCCGCGTCGCAAGGAGGTTCAATGGGGAAGGTCGCGTCGTTCTTCGCTCAAGCTCTCGCTCGAAGAATCTACGGCTTCTACCCTCACGAAACCCTAGACTCCTCCTATTCCGACATGCTTCTCATGCATTTCTACGAATCGAGCCCGTACCTGAAATTCGCGCACTTCACCGCGAACCACGCCATCCTCGAAGCCTTCGCCTCCGCAGACACTGTGCACGTCATTGATTTTGGCCTAAAGCAGGGGTTGCAGTGGCCCGCCTTGATGCAAGCGCTCGCGGTCCGTCCGGGAGGTCCGCCAGTGTTCCGTCTCACCGGGATCGGACCGCCGCGGCTAGATGACGCCGATTCCAACGCGCTGAATCAGGTCGGTTTGAAACTGGCGGAACTCGCTCAAAAAATTTGTGTTCAATTCGAGTTCCGCGGATTCGTGTGTAACAGTTTAGCGGATCTAGATCCGTCCATGCTCGAGATCCGAGCCGGAGAATCCGTGGCGGTTAACTCTATCTTCGAGCTTCACCGGTTACTGGCGCGACCTGTTGAGATTGAAAAGGTTTTAGCCACAGTTAAGAGGATTAACCCAGACATTTTTACCGTGGTGGAGCAAGAAGCGAACCACAACGGTCCGGTTTTTCTAGAGCGGTTCACGGAGGCTTTGTACTATTACTCGAGTTTGTTTGACTCGTTGGAGGCATCGGTGGCGGCGTCGAGTGAAGAAGTGTTGGTGATGTCGGAGATGTACTTGGGGAGGCAGATATGTAACGTTGTGGCGTGTGAGGGGGAGGACCGCGTGGAGAGGCACGAGACGCTGGGTCAGTGGAGAGGGCGCTTCAGTTTGGGCGGGTTCGAACCGGTTCATTTGGGTTCGAACGCGTTCAGGCAAGCGAGGATGTTGCTGGCCCTCTACGCTGAGGGGGGAGAAGGCTATAGGGTGGAAGAGAACAATGGCAGCCTCTTGCTTGGGTGGCACACGAGGCAACTCGTTGCCACGTCTGCGTGGAGACTGGCGCCCGGTGAGTTGTGCTGA 1635 0.5413 MKRERMENANAVRGECASSGEEKKMFEEEENEDKLLAGAGYKVCPSDMADVAHKLQQLEMVMEEDGISHLATNTVHYDPTDLYGWVQNILNNAPNYTSTISTNINNNSFTPSPLINVPENDPRAIPLPYIEAYPQIENQNCLKRFKSSSFPCSPAISSGNALPVVMVEEPGVHLVHALMACAEAVQLGNASLAVGLVKHAGTLAASQGGSMGKVASFFAQALARRIYGFYPHETLDSSYSDMLLMHFYESSPYLKFAHFTANHAILEAFASADTVHVIDFGLKQGLQWPALMQALAVRPGGPPVFRLTGIGPPRLDDADSNALNQVGLKLAELAQKICVQFEFRGFVCNSLADLDPSMLEIRAGESVAVNSIFELHRLLARPVEIEKVLATVKRINPDIFTVVEQEANHNGPVFLERFTEALYYYSSLFDSLEASVAASSEEVLVMSEMYLGRQICNVVACEGEDRVERHETLGQWRGRFSLGGFEPVHLGSNAFRQARMLLALYAEGGEGYRVEENNGSLLLGWHTRQLVATSAWRLAPGELC 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00312 544 MobiDBLite consensus disorder prediction 1 26 - -
Spst8g00312 544 ProSiteProfiles GRAS family profile. 165 537 IPR005202 -
Spst8g00312 544 SMART DELLA_2 33 103 - -
Spst8g00312 544 Pfam Transcriptional regulator DELLA protein N terminal 33 92 IPR021914 -
Spst8g00312 544 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 130 533 IPR005202 -
Spst8g00312 544 Gene3D - 31 92 IPR038088 -
Spst8g00312 544 Pfam GRAS domain family 174 537 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00312 Spst-Chr8 2741677 2743311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00312 1 539 GRAS Transcription Factor Family AT2G01570 54.054 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst8g00312 GRAS 9.1e-132 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00312 8 2741677 2743311 Spst8g00312 8 2741677 2743311 ECH
Spst8g00312 8 2741677 2743311 Spst2g02314 2 22492154 22494085 ECH
Spst8g00312 8 2741677 2743311 Spst1g02265 1 31301327 31303108 PCT