Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g02390 ATGTTGTTTGACGAGATGGGGTTTTGCAATGATTTGGATACTATACCTGCTACCCTTGGAGAAGAAAATATTACCGCCCGGCAAACTGATACAGAGGCCATAGTTGAGGATGATTTTAGCGACGAAGAAATTGGAGTAGATGAGCTTGAGCACAGGATGTGGAAGGACAAAATGCTTCTGAAGCGATTAAAGGAACAAAGTAAATCTAAAGAAGGAATTGATGCTGTGAAGCAGAGGCAGTCGCAAGAACAGGCAAGGAGGAAAAAGATGTCCAGGGCGCAAGATGGAATCTTGAAGTACATGCTGAAGATGATGGAGGTTTGCAAGGCCCAAGGATTCGTTTATGGGATAATTCCCGAGAAGGGGAAACCGGTGACGGGAGCATCTGATAATCTTCGTGAATGGTGGAAGGATAAAGTCAGATTTGATCGTAATGGACCTGCTGCTATAACGAAGTATCAAGCTGATAATGCTATCCTGGGGAGAAACGATGGATGCAATTCGATTGGCCCAACTCCACATACCTTGCAAGAGCTGCAGGACACAACCTTGGGTTCTCTCTTGTCAGCACTCATGCAGCACTGTGATCCTCCTCAAAGGCGGTTTCCATTGGAGAAGGGTATTCCTCCACCATGGTGGCCCACAGGAAATGAACTGTGGTGGCCTGAAATTGGTTTACCTAAAGATCAAAGTGCACCTCCTTACAAGAAGCCCCATGACCTAAAGAAGGCATGGAAAGTTGGTGTTCTGACTGCAGTTATAAAACACATGTCCCCGGATATTGCCAAAATTCGCAAGCTTGTGAGGCAGTCCAAATGTCTCCAAGATAAGATGACAGCCAAGGAAAGTGCAACCTGGCTGGCAATCATCAATCAAGAGGAGGCCTTGGCAAGAGAGCTTTACCCTGATTATATTCCCCCATTAGCCTCAGCTGGAGGTAGTGGATCTTTGGTCATCAATGATAGCAGTGAGTATGATGTTGAAGGGGGTGAGGATGATCCTAACTTTGATGTAGAAGACAGGAAACATGAGAATATTCATATGTCTAATCTGGGGATGGAGAGAATAAGGGGAACTCTGCCAGTTCAGCGGCCCTCTTTTTCAATCAAGGGAGAGGCAGTTACAAATTTGGATTTCATTAGGAAGAGGAAGGTCCCTAATGACTTTAACATGATGGATTTGAAAATTTACACTTGTGAACAGCCTCAGTGCCCTTACAGTCAAGTTCACCTTGGTTTCTCTGACAGAGTTTCTAGGGACAATCATCGGTTAATTTGTGCATATAGATGTTCTTCTTCAGAATTTGGGGGTCCAAATTTTCACGTTAACGAGGTAAAGCCAGTTATATACCCCCAGTCATTAGTTCAACCGAAACCTACTGCTCAATCTGCTATTATGGTTCCGCCTTTAATTGATCTTACTGGACTTGAAGTTTCAGAAGAAGGCAAGAAAATGATCAGCGACCTTATGACTAACTATGATACAAATGTTCAAGGCAACAAGAACATAAGTTCCTGTAATCGTGTAGCTGGCGAAAATTTGAACCTTTCTCAGAATTGCATGCAGCAGCAACAGGACAACTTCATTCGCGGCCAAGGAATCACTATTGAAGGAAACGTCTTCGATGAAGCAAACATGTCAAATAATCATCATTTGTTTGCAAGAGATGAATGCCAATTTGACCGGTTCAAAGCTTTGAATACCTCCTTCGAGACCAATCACAACAACAATAACTTTCACTCGATGTTTGGGTCCTTTTGTGATTTGGCATCATTTGATATGAAGGAGGATATGCAAGGCGTTGCGATGGATGCTCTTCAGAAACAGCCAGATTTTTCTATATGGTATCAGTGA 1854 0.4337 MLFDEMGFCNDLDTIPATLGEENITARQTDTEAIVEDDFSDEEIGVDELEHRMWKDKMLLKRLKEQSKSKEGIDAVKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQADNAILGRNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGIPPPWWPTGNELWWPEIGLPKDQSAPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYIPPLASAGGSGSLVINDSSEYDVEGGEDDPNFDVEDRKHENIHMSNLGMERIRGTLPVQRPSFSIKGEAVTNLDFIRKRKVPNDFNMMDLKIYTCEQPQCPYSQVHLGFSDRVSRDNHRLICAYRCSSSEFGGPNFHVNEVKPVIYPQSLVQPKPTAQSAIMVPPLIDLTGLEVSEEGKKMISDLMTNYDTNVQGNKNISSCNRVAGENLNLSQNCMQQQQDNFIRGQGITIEGNVFDEANMSNNHHLFARDECQFDRFKALNTSFETNHNNNNFHSMFGSFCDLASFDMKEDMQGVAMDALQKQPDFSIWYQ 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g02390 617 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 31 585 IPR006957 GO:0003700|GO:0005634
Spst6g02390 617 Gene3D - 79 155 IPR023278 GO:0003700|GO:0005634
Spst6g02390 617 Pfam Ethylene insensitive 3 47 294 IPR047091 GO:0003700
Spst6g02390 617 FunFam Ethylene insensitive 3-like 1 167 304 - -
Spst6g02390 617 FunFam Ethylene insensitive 3-like 1 79 157 - -
Spst6g02390 617 SUPERFAMILY DNA-binding domain of EIN3-like 173 297 IPR023278 GO:0003700|GO:0005634
Spst6g02390 617 MobiDBLite consensus disorder prediction 70 90 - -
Spst6g02390 617 Gene3D - 171 304 IPR023278 GO:0003700|GO:0005634
Spst6g02390 617 Coils Coil 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g02390 Spst-Chr6 45660161 45662014 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g02390 1 616 EIL Transcription Factor Family AT3G20770 57.585 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Spst6g02390 EIN3 1.9e-129 No_clan