Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g01528 ATGTCCTCCTCTCTCATGGCCAGCCCCACCGATCGCTCACGTGACTCCCACCGCCTGAAGAAGAAGAAGAAAACCCCCGCCAAGCCCCTCCCCCAACACGACCACTCCCACTCCAGATGGAAAACCCACGCGCAGCACCACCTATATTCCTCCAAGCTCCACCAGGCCCTCGCGCATGTCAACATCTCCGCCGACGCGCCGCACCGTGGCAGGGCCGTCCGCGAGGCCGCCGACAGAGTCCTCGCCGCCGCCGCCCGCGGGAGGACGCGCTGGAGCCGCGCCATCCTCACCAACCGCCTCAAGCTCAAGTTCAGGAAGACCCCGCACAAGCGACCCAAGGTCGTTGGGCCGGCCCGGCCCAAGAAGCCCCGCTTCAGCGTCCTCCGGCTCAAGGGAAAAACCCTTCCCGCGGTTCAGCGCAAAGTTAGAGTCCTGGGCCGGTTGGTCCCCGGTTGCAGAAAAGAACCGCTTCCGATCATTCTCGAAGAAGCCATCGATTACATACCCGCGCTTGAGATGCAGGTTCGCGCCATGGCCGCTCTCGCTGACTTACTCCTCGGCTCCTCTTCTTCCTCCTCCTCCGCCGCCGCCGAATCCACCTCCGCGCCGCCGAGTTGA 618 0.6472 MSSSLMASPTDRSRDSHRLKKKKKTPAKPLPQHDHSHSRWKTHAQHHLYSSKLHQALAHVNISADAPHRGRAVREAADRVLAAAARGRTRWSRAILTNRLKLKFRKTPHKRPKVVGPARPKKPRFSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPIILEEAIDYIPALEMQVRAMAALADLLLGSSSSSSSAAAESTSAPPS 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g01528 205 MobiDBLite consensus disorder prediction 1 44 - -
Spst6g01528 205 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 187 IPR036638 GO:0046983
Spst6g01528 205 CDD bHLH_AtIBH1_like 127 176 IPR044549 GO:0006355
Spst6g01528 205 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 42 189 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g01528 Spst-Chr6 14366219 14366836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g01528 37 185 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 55.689 1.51e-50 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g01528 - - gmx:100792237 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g01528 6 14366219 14366836 Spst6g01528 6 14366219 14366836 ECH
Spst3g02935 3 79014862 79015515 Spst6g01528 6 14366219 14366836 PCT