Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00785 ATGGAGCACGGAGGTGGAGAAGGAGGTGAGATGAACAAACTACCTCAGAGTTCAAGAATGAAGGAGATGCAACAAGGGGAGGCACAACCTCAGGTTCAGGCCCCTCAACAACCCCAAAAGTGTCCTCGATGCGACTCTCTCAACACCAAATTTTGCTATTACAACAACTACAGCTTGTCACAGCCTCGTTACTTTTGTAAAACATGCAGAAGGTACTGGACTCAAGGTGGAACCTTAAGGAACGTTCCCGTTGGGGGTGGTTGCCGCAAGGGTAAGCGCGCCAAGAATTCCAATCCATCACCATCGGACAATTCATCTTCCCGGTCGCTGCAGCAACAACAACAATCACAAGACGTGGTGGTTCAAAACCAACCACCACCTTTGACAACGGTGGTGAGGGCTAAAGACCCTTCTTCAATTGTGGCTTCACCTTTCTACCAAAGTGGTGGGTACTTGTCTTCTTTGGCTGCTATGCATTCGCTCAATCCGTCATCACACCCTTTTGGTCAGTCTCTTAATAGTGACGCCTTGCGTTCTTCCAATTTGGGCCTTCTATCTGGTTTCAATATTCAGCGGCCAATTGGACCAATAGGGACAATTCGTCCACCGCAATTGTATCAAGTGGGGAGTGGTCAAAGGGAAGTGGTGTCTATCTATGATCAAGGTTTGGTTAATCCATCATCCAGCATGGCTAATACTAGTACTAATAGCAGTGGTGTTTCTCATCATAATTGGCCTCACACCTTCATCAATAATAATACTAATGCTAGTAGTAGAGCCTCTGATGCTTCTTTGTGGAGCACCATCAGTACCACTATTGGTGGTAACTCTGAGAGGACAAGTCCTGGTGCTGGTACTGTTTCTGGGTCGTCTTTGGTCCAAAATCAATGGTCTGATATTCCAGGGTATGGCCCTCCACCGTGA 924 0.4719 MEHGGGEGGEMNKLPQSSRMKEMQQGEAQPQVQAPQQPQKCPRCDSLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRAKNSNPSPSDNSSSRSLQQQQQSQDVVVQNQPPPLTTVVRAKDPSSIVASPFYQSGGYLSSLAAMHSLNPSSHPFGQSLNSDALRSSNLGLLSGFNIQRPIGPIGTIRPPQLYQVGSGQREVVSIYDQGLVNPSSSMANTSTNSSGVSHHNWPHTFINNNTNASSRASDASLWSTISTTIGGNSERTSPGAGTVSGSSLVQNQWSDIPGYGPPP 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00785 307 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 24 228 IPR045174 GO:0003700|GO:0006355
Spst6g00785 307 Pfam Dof domain, zinc finger 37 93 IPR003851 GO:0003677|GO:0006355
Spst6g00785 307 ProSitePatterns Zinc finger Dof-type signature. 41 77 IPR003851 GO:0003677|GO:0006355
Spst6g00785 307 ProSiteProfiles Zinc finger Dof-type profile. 39 93 IPR003851 GO:0003677|GO:0006355
Spst6g00785 307 MobiDBLite consensus disorder prediction 83 124 - -
Spst6g00785 307 MobiDBLite consensus disorder prediction 274 298 - -
Spst6g00785 307 MobiDBLite consensus disorder prediction 95 124 - -
Spst6g00785 307 MobiDBLite consensus disorder prediction 274 307 - -
Spst6g00785 307 MobiDBLite consensus disorder prediction 1 40 - -
Spst6g00785 307 MobiDBLite consensus disorder prediction 17 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00785 Spst-Chr6 7097176 7098099 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00785 12 97 C2C2-Dof Transcription Factor Family AT5G60200 62.791 5.89e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Spst6g00785 zf-Dof 1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00785 - - gmx:100817065 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00785 6 7097176 7098099 Spst6g00785 6 7097176 7098099 ECH