Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g02137 ATGGCGACTTGTGTTTTTGATCTTCAAGCTTCTCCTGCACAAGATGCTGAAGCTCTTGGTCAAGTTTTCAAAGGACGGGGTTCTGATGGAATCATCATAGCAATATTGGGTCACAGAAATGTTGATCAGAGACAGGAAATCAAGAAGGCTTATGAGGATATTTACGAAGAGAATCTCATCCAACGGCTTGAGTCTGAGATCTCTGGTGATTTTGAGAAAGCTGTGTACTTGTGGATGTTGGAGCCTGCATATCGTGATGCTGTTTTGATGAATGAAGCAATCAAGAATGGTCCTAAAGACTATCACGTGATTGCAGAGATTGCTTGTGTCCTTTCAGCTCAAGAACTCTTGGCAGTGAGAAGTGCCTATCACGACCGCTACAAGCTTTCATTGGAAGAAGATGTGGCAAGTCACACCACTGGCCATCTTCGCCAGCTGTTGGTTGGATTGGTTGGCTCATACAGATATGAGGGTGACGAGATCAATGCAAAATTGACTCGAATTGAAGCTAATGTTCTTCATGAATCAATCAAGGAGAAGAAAGCCAACTATGAAGAAGTCATCATGATCCTTACCACAAGAAGCAAAAATCAGCTTGTTGCAACTCTCAACAGCTATAGAGATGAGCATGGAATCTCCATCAGTAAGAAATTGGTGGATCAGAAATCTAACGATTTTCTCAAGGTGTTGCACACTGCTATTCGCTGCATCAATGACCCCAAGAAGTACTATGAGAAGGCTTTGCGCAATATCATGAAGAAGTTGGGAACTGATGAGGATGGACTGAGTCGTGTGGTTGTGACAAGGGCTGAGAAGGATTTGAAGGACATCAAGGAGCTCTACTACAAGAGGAACAGTGTTCACCTTGAGGATGAAGTGTCCAAGGAAACATCAGGGAACTACAAGAAGTTCATCCTCACTTTGCTGGGTTAA 933 0.4319 MATCVFDLQASPAQDAEALGQVFKGRGSDGIIIAILGHRNVDQRQEIKKAYEDIYEENLIQRLESEISGDFEKAVYLWMLEPAYRDAVLMNEAIKNGPKDYHVIAEIACVLSAQELLAVRSAYHDRYKLSLEEDVASHTTGHLRQLLVGLVGSYRYEGDEINAKLTRIEANVLHESIKEKKANYEEVIMILTTRSKNQLVATLNSYRDEHGISISKKLVDQKSNDFLKVLHTAIRCINDPKKYYEKALRNIMKKLGTDEDGLSRVVVTRAEKDLKDIKELYYKRNSVHLEDEVSKETSGNYKKFILTLLG 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g02137 310 SMART annex3 98 150 IPR018502 GO:0005509|GO:0005544
Spst5g02137 310 SMART annex3 256 308 IPR018502 GO:0005509|GO:0005544
Spst5g02137 310 SMART annex3 183 233 IPR018502 GO:0005509|GO:0005544
Spst5g02137 310 SMART annex3 26 78 IPR018502 GO:0005509|GO:0005544
Spst5g02137 310 Gene3D Annexin 164 238 IPR037104 GO:0005509|GO:0005544
Spst5g02137 310 ProSiteProfiles Annexin repeat profile. 164 235 IPR018502 GO:0005509|GO:0005544
Spst5g02137 310 ProSiteProfiles Annexin repeat profile. 10 80 IPR018502 GO:0005509|GO:0005544
Spst5g02137 310 ProSitePatterns Annexin repeat signature. 256 308 IPR018252 GO:0005509|GO:0005544
Spst5g02137 310 PRINTS Annexin family signature 63 79 IPR001464 GO:0005509|GO:0005544
Spst5g02137 310 PRINTS Annexin family signature 296 309 IPR001464 GO:0005509|GO:0005544
Spst5g02137 310 PRINTS Annexin family signature 252 272 IPR001464 GO:0005509|GO:0005544
Spst5g02137 310 PRINTS Annexin family signature 90 111 IPR001464 GO:0005509|GO:0005544
Spst5g02137 310 PRINTS Annexin family signature 172 198 IPR001464 GO:0005509|GO:0005544
Spst5g02137 310 PRINTS Annexin family signature 23 45 IPR001464 GO:0005509|GO:0005544
Spst5g02137 310 PRINTS Plant annexin signature 159 179 IPR009118 -
Spst5g02137 310 PRINTS Plant annexin signature 224 242 IPR009118 -
Spst5g02137 310 PRINTS Plant annexin signature 117 131 IPR009118 -
Spst5g02137 310 Gene3D Annexin 240 310 IPR037104 GO:0005509|GO:0005544
Spst5g02137 310 Gene3D Annexin 2 80 IPR037104 GO:0005509|GO:0005544
Spst5g02137 310 ProSiteProfiles Annexin repeat profile. 239 310 IPR018502 GO:0005509|GO:0005544
Spst5g02137 310 Pfam Annexin 86 150 IPR018502 GO:0005509|GO:0005544
Spst5g02137 310 Pfam Annexin 14 75 IPR018502 GO:0005509|GO:0005544
Spst5g02137 310 Pfam Annexin 170 231 IPR018502 GO:0005509|GO:0005544
Spst5g02137 310 Pfam Annexin 246 308 IPR018502 GO:0005509|GO:0005544
Spst5g02137 310 PANTHER ANNEXIN 12 308 - -
Spst5g02137 310 FunFam Annexin 164 238 - -
Spst5g02137 310 SUPERFAMILY Annexin 8 310 IPR037104 GO:0005509|GO:0005544
Spst5g02137 310 FunFam Annexin 239 310 - -
Spst5g02137 310 Gene3D Annexin 81 151 IPR037104 GO:0005509|GO:0005544
Spst5g02137 310 ProSiteProfiles Annexin repeat profile. 81 152 IPR018502 GO:0005509|GO:0005544
Spst5g02137 310 FunFam Annexin 81 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g02137 Spst-Chr5 56737909 56741269 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g02137 5 56737909 56741269 Spst5g02137 5 56737909 56741269 ECH
Spst5g02137 5 56737909 56741269 Spst11g00172 11 7052562 7055042 PCT