Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g02064 ATGGGAATTGCTGAATTGGGGAACTTCATCTGGGTTTGTCACTATCTGAGTGATTCATCTATTTTGGAGGCAAAGAGAGGTGATTCTTTGGTCTTACACAGATCCGAGCTTCAATTTCTATACCAAGTGAAGGGAGCTGCTTCTGACGTGGGACTGGGATACGAATCTCGGATGGAGTCAGAAGGAGAAGCTGGGGCAAAGCCAATGAATGCATTGGGAGGCCAAGTCTGCCAGATCTGTGGTGATAATATTGGGAACAATGTGGATGGCAATCCGTTCATTGCTTGCGATGTTTGTGCTTTTCCCGTCTGCAGGCCTTGCTATGAATATGAAAGGAAGGATGGAAATCAGTCTTGCCCTCAGTGCAAGACCCGCTACAAGAGGCACAAAGGTAGTCCTGCTATTCTTGGAGACCGGGAAGAGGATGGGGGTGCTGATGATGGTGCAAGTGACTTCACTTACAATTCAGAAAATCAGAACCACAAACAGAAGATTGCAGAGCGCATGTTGGGCTGGCAAATGGCATATGGTCGAGCAGAGGAGGTTGGTCCTCCAAATTATGACAAGGAAGTTTCTCACAATCACATTCCTATGCTCTCAGGTGGACAGGAGGTTTCCGGAGAATTATCTGCAGCCTCACCTGAGAGGCTATCAATGGCATCTCCTGGTGGCCGTGGGAAGCGTGTCCATAATCTTCAATATTCGTCTGACATTAATCAATCACCAAATATTAGAGTTGGGGATCCTGGATTGGGCAATGTGGCATGGAAGGAAAGAGTTGATGGCTGGAAAATGAAGCAAGATAAGAATGCTGCTCCAATGAGCACAGGCCAAGCTACTTCTGAAAGAGGAGCTGGAGATATTGATGCTAGTACTGATGTGCTTGTGGATGATTCCTTGTTGAATGATGAGGCTCGGCAACCTCTCTCTAGGAAGGTTTCTATTCCTTCATCTAGGATCAATCCATACCGTATGGTTATTGCTCTGCGGCTAGTTATCCTATGCATTTTTCTGCATTACCGAATAACAAATCCTGTGCCCAATGCATATGCACTGTGGTTGATATCAGTTATATGTGAGATTTGGTTTGCTATATCTTGGATATTGGATCAATTCCCTAAATGGCTCCCCGTGAACCGTGAAACATATCTTGACAGACTTGCACTAAGATATGATCGGGAGGGGGAACCATCGCAGCTAGCAGCTGTTGACATTTTTGTCAGTACTGTTGATCCATTAAAAGAGCCTCCACTTGTGACTGCTAACACTGTGCTATCTATTCTTGCTGTTGACTACCCAGTGGATAAGGTGTCCTGTTATGTCTCTGATGATGGTGCTGCTATGTTGACCTTTGAGGCACTGGCTAAGACAGCAGAATTTGCAAGGAAATGGGTTCCTTTCTGCAAGAAATATAACATCGAACCCCGGGCACCTGAGTGGTATTTTGCACTGAAGATTGACTATTTGAAAGATAAGGTTCAACCATCATTTGTCAAAGATCGAAGAGCAATGAAGAGAGAATATGAAGAATTTAAAATCCGTGTCAATGGACTTGTTGCAAAGGCACAAAAGATTCCTGAAGAAGGATGGGTAATGCAAGATGGAACACCGTGGCCTGGAAACAACACTAGAGACCATCCTGGAATGATTCAGGTTTTCTTGGGCCAAAGTGGAGGACTTGACACTGAGGGTAATGAACTTCCACGTTTAGTCTATGTTTCTCGTGAAAAACGTCCAGGGTTCCAACATCATAAGAAGGCTGGTGCCATGAATGCACTTGTTCGAGTGTCAGCTGTCCTTACTAACGGACCTTTCTTATTGAATCTTGATTGTGATCACTACATAAACAACAGTAAAGCGTTGAGGGAAGCTATGTGCTTTATGATGGATCCCAACCTTGGGAAAAATGTTTGCTACGTCCAGTTTCCACAGAGGTTTGATGGTATTGATAGGAATGATCGATATGCCAACCGTAATACTGTTTTCTTTGATATAAATTTGAGAGGTTTGGATGGCATTCAAGGCCCTGTTTATGTGGGTACTGGGTGTGTCTTTAATAGAACAGCTTTATATGGCTATGAGCCCCCTGTTAAACCTAAGCATAAAAAACCTGGGGTGCTTTCTTCACTCTGCGGAGGGAACCGGAAAAAGAGCTCAAAATCTAGCAAAAAAGGATCAGACAAGAAAAAATCTAGCAAGAATGTTGACCCAACTGTGCCCATCTTCAGTCTTGATGATATAGAAGAAGGGGTGGAAGGTGCTGGATTTGATGATGAGAAATCACTACTCATGTCACAAATGAGCCTTGAGAAAAGGTTTGGTCAGTCTGCTGTCTTTGTTGCCTCTACACTCATGGAAAATGGTGGCGTTCCTCAGTCTGCAACTCCAGAAACTCTTCTTAAGGAGGCAATTCATGTTATCAGTTGCGGTTATGAGGATAAAACAGAATGGGGAAGTGAGATAGGATGGATCTATGGTTCCGTCACAGAAGATATTCTTACTGGATTCAAGATGCATGCCCGTGGTTGGAGGTCTATATACTGCATGCCCAAGCTACCAGCGTTTAAAGGTTCTGCTCCTATCAATCTTTCAGATCGTCTGAACCAAGTGCTTCGATGGGCTTTAGGTTCTGTGGAAATTCTTCTAAGTCGACATTGTCCCATCTGGTATGGTTATAGTGGCAGGCTAAAGTGGCTCGAGAGGTTTGCATATGTGAACACCACAATCTATCCAGTCACTTCCATTCCCCTTCTCATGTATTGTACCTTACCTGCTGTCTGTCTCCTGACTAACAAGTTCATTATTCCACAGATTAGTAACATTGCAAGTATATGGTTTATCTCTCTCTTTCTTTCCATCTTTGCAACTGGTATCCTTGAGATGAGATGGAGTGGCGTTGGAATTGATGAGTGGTGGAGAAACGAACAATTTTGGGTTATTGGTGGTGTTTCGGCCCATCTTTTTGCCGTGTTCCAAGGTTTACTCAAAGTGCTTGCTGGAATTGACACTAACTTCACTGTTACCTCAAAGGCATCAGATGAAGATGGAGACTTTGCAGAACTCTACATGTTCAAATGGACAACCCTCCTCATCCCACCCACAACACTTCTCATCATAAACTTGGTTGGAGTTGTTGCAGGTATCTCCTATGCCATCAACAGTGGCTACCAATCATGGGGTCCCCTCTTTGGTAAGCTTTTCTTTGCATTTTGGGTGATCATCCATCTCTACCCCTTCCTCAAAGGTCTCATGGGACGCCAGAACAGAACACCAACCATTGTGGTGGTCTGGTCTATTCTTCTTGCATCCATTTTCTCCCTCTTGTGGGTCCGAATCGACCCTTTTACCACCAAAGTCACTGGTCCTGATGTTGAGCAGTGTGGAATCAACTGCTAG 3396 0.4426 MGIAELGNFIWVCHYLSDSSILEAKRGDSLVLHRSELQFLYQVKGAASDVGLGYESRMESEGEAGAKPMNALGGQVCQICGDNIGNNVDGNPFIACDVCAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPAILGDREEDGGADDGASDFTYNSENQNHKQKIAERMLGWQMAYGRAEEVGPPNYDKEVSHNHIPMLSGGQEVSGELSAASPERLSMASPGGRGKRVHNLQYSSDINQSPNIRVGDPGLGNVAWKERVDGWKMKQDKNAAPMSTGQATSERGAGDIDASTDVLVDDSLLNDEARQPLSRKVSIPSSRINPYRMVIALRLVILCIFLHYRITNPVPNAYALWLISVICEIWFAISWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALAKTAEFARKWVPFCKKYNIEPRAPEWYFALKIDYLKDKVQPSFVKDRRAMKREYEEFKIRVNGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKNVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPVKPKHKKPGVLSSLCGGNRKKSSKSSKKGSDKKKSSKNVDPTVPIFSLDDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKTEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKLPAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYSGRLKWLERFAYVNTTIYPVTSIPLLMYCTLPAVCLLTNKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYMFKWTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTKVTGPDVEQCGINC 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g02064 1131 Pfam Zinc-binding RING-finger 67 142 IPR027934 -
Spst5g02064 1131 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 527 694 IPR029044 -
Spst5g02064 1131 FunFam Cellulose synthase 520 694 - -
Spst5g02064 1131 FunFam Cellulose synthase 60 151 - -
Spst5g02064 1131 Pfam Cellulose synthase 403 1125 IPR005150 GO:0016020|GO:0016760|GO:0030244
Spst5g02064 1131 CDD mRING-HC-C4C4_CesA 75 125 - -
Spst5g02064 1131 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 59 152 IPR013083 -
Spst5g02064 1131 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 306 1098 - -
Spst5g02064 1131 MobiDBLite consensus disorder prediction 266 288 - -
Spst5g02064 1131 MobiDBLite consensus disorder prediction 133 160 - -
Spst5g02064 1131 ProSiteProfiles Zinc finger RING-type profile. 77 123 IPR001841 -
Spst5g02064 1131 MobiDBLite consensus disorder prediction 699 737 - -
Spst5g02064 1131 SUPERFAMILY Nucleotide-diphospho-sugar transferases 417 943 IPR029044 -
Spst5g02064 1131 SUPERFAMILY RING/U-box 62 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g02064 Spst-Chr5 56083239 56090738 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst11g00197 11 7340682 7346263 Spst5g02064 5 56083239 56090738 PCT