Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g02020 ATGGGTCCAGAAAGCCAGGAGAACCACACCACAGGTCCTACAGAAAATCCTGTAAAAGACAATGCCAGTTCTTCTGAAAATCCTGCAGGAGATCAAATGGGGATTGCAGGAAAAAAGGTTAATAACATAGCAGATGTTGGAGAGAATCCTACAAAGGAACACGTAGCAGGTGGTGTAGAAAAATCTGCTAGCGACCAATTAGATGGTTTAGTAAATATTGCAAGCTACCCCGCAGGTGGGGCAGAAAATCCTGTAAATGGACAAACATATACTGCACAAAATCCTTCAAGTGAACAAGCAGGCAGTGTGGAAAACCTGTTGACCTTCGAAGCAGGTGGTGTGGAAAATCCTGCTAATGGTCAAGCAGCTGGTGGCGCAGAAAATTCTGTAGACAGCAAAGCAGGTGCATCAGAAAGTGCTATGAATGATAATGCTGGTGGTGAAGAAAGTCCTACAAGGAACCTTGTAAGTGGTGCAGAAATTTCTTTAAGCAAACAAACAGATCCTATAGAAAACAGCAAAAATGAAACCTCTGTATGCTGCAAAGCAGATCGCCTTCCAGAAGAAGCACAGGAGATACTGAAATCATTGGCAAGTCACTGGGAGGATGTACTTGATGCAAATGCATTGCAGGTGTTCCCTCTCAAAGGAGCAATGACAAATGAGGTATTCCAGATAAAGTGGCCAACTAGGACAGGAGAAACTTCACGAAAGGTTATTGTTAGAATTTATGGTGAGGGTGTGGACGTGTTCTTTGATAGGGATCATGAGATTCAAACATTTGAATTCATGTCAAAGAATGGGCAAGGTCCTCGCCTACTCGGACGATTTACAAATGGTCGTGTTGAAGAGTTTATCCATGCACGGACATTATCAGCATCTGATCTACGTGATCCATTCATTTCTGCTCTTATAGCGGCCAAATTGAAGGAGTTTCATGATCTAGATATGCCTGGTGGAAAGAAATTTCACCTTTGGGATAGATTGCGAAATTGGCTTAGTGAAGCCAAACGTTTATCATCCCCTAAAGAAGTTGAAGCATTTTATTTGGACACAATAGACAAAGAAATCACCATTTTGGAAAGGGAATTATCAGGCCCACACCAAAAGATAGGATTTTGCCACAATGATTTACAATATGGTAACATAATGCTTGATGAAGAGACCGATTCTGTGACCATCATAGACTATGAGTACGCCAGCTATAATCCTGTAGCATTTGATATAGCCAACCACTTCTGTGAGATGGCTGCTAACTATCACACAGAAGAGCCTCATATACTTGACTACAATAAATATCCTGATTTTGAGGAGCGTCAAAGATTTGTGCTGGCATACTTGAGTACATCTGGTGAACAGTGTAGTGATGATGAAGTGGAGCTGCTACTTCAAGACATTGAGAAGTATACTCTTGCAAATCATCTATTCTGGGCAGTTTGGGGAATAATCTCGGCTCAAGTAAACACAATTGACTTTGACTACAAGGAGTATGCTAAACAGAGGTTTCAAGAGTACTGGGCCAGGAAACCTTATCTTTTAATAAACTCTGACGCACCTTCTCCGTATAATGTGCCTGAGGGTACAGGAGAACTAGCACAAGCAGCGCCCTCCCACAAATCGAAGAACTCTAGTATATTCAGGAAGATGAAGAGAGTTTTGGGTCTCGGTTTATTCAGGTCCAGGAACTAG 1689 0.4198 MGPESQENHTTGPTENPVKDNASSSENPAGDQMGIAGKKVNNIADVGENPTKEHVAGGVEKSASDQLDGLVNIASYPAGGAENPVNGQTYTAQNPSSEQAGSVENLLTFEAGGVENPANGQAAGGAENSVDSKAGASESAMNDNAGGEESPTRNLVSGAEISLSKQTDPIENSKNETSVCCKADRLPEEAQEILKSLASHWEDVLDANALQVFPLKGAMTNEVFQIKWPTRTGETSRKVIVRIYGEGVDVFFDRDHEIQTFEFMSKNGQGPRLLGRFTNGRVEEFIHARTLSASDLRDPFISALIAAKLKEFHDLDMPGGKKFHLWDRLRNWLSEAKRLSSPKEVEAFYLDTIDKEITILERELSGPHQKIGFCHNDLQYGNIMLDEETDSVTIIDYEYASYNPVAFDIANHFCEMAANYHTEEPHILDYNKYPDFEERQRFVLAYLSTSGEQCSDDEVELLLQDIEKYTLANHLFWAVWGIISAQVNTIDFDYKEYAKQRFQEYWARKPYLLINSDAPSPYNVPEGTGELAQAAPSHKSKNSSIFRKMKRVLGLGLFRSRN 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g02020 562 PANTHER CHOLINE/ETHANOALAMINE KINASE 167 513 - -
Spst5g02020 562 MobiDBLite consensus disorder prediction 82 100 - -
Spst5g02020 562 MobiDBLite consensus disorder prediction 1 100 - -
Spst5g02020 562 Pfam Choline/ethanolamine kinase 236 437 - -
Spst5g02020 562 SUPERFAMILY Protein kinase-like (PK-like) 184 513 IPR011009 -
Spst5g02020 562 MobiDBLite consensus disorder prediction 122 155 - -
Spst5g02020 562 Gene3D Phosphorylase Kinase; domain 1 198 285 - -
Spst5g02020 562 Gene3D - 245 506 - -
Spst5g02020 562 MobiDBLite consensus disorder prediction 113 155 - -
Spst5g02020 562 MobiDBLite consensus disorder prediction 1 30 - -
Spst5g02020 562 CDD ETNK_euk 210 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g02020 Spst-Chr5 55673036 55679180 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g02020 175 517 Acyl Lipid Metabolism Gene Families AT1G74320 66.764 4.11e-175 497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g02020 5 55673036 55679180 Spst5g02020 5 55673036 55679180 ECH
Spst5g02020 5 55673036 55679180 Spst11g00346 11 17923527 17926915 PCT