Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01974 ATGGATTCTATGGATGACTACAAAATGAGTGGTGTTGACAGTGGTGCTGATTATGACTGCGACGCTTTGATGAGAAACGTGGAAGAAGAAATGAGGGTGGGAGAAGGGAGTGAGGAGGAGGAGGAAGAAGAAGAGATAACGATCGAGGAACTGGAGACAAGGATGTGGAGAGATCGCATGATGTTGAGGAAGCTTAAGGAAAAGAAGAGGGAGAAGGAGAAAGGAGAAACGTTGGAGATGATGAAGAAGAAAGCGTTGAGTCGTGCACAAGACACAGTGCTGAAGAACATGCTGAAGATGATGGAGGTTTGTGGCGTTCGTGGGTTCGTTTATGGCATCGTTCCTGAGAAGGGGAAGCCAATGAGTGGAGCTTCTGATAATCTGAGAGGTTGGTGGAAGGACAGGGTCAAGTTTGATCGTAATGGTCCTGCTGCTATGCTCAGTGTTCAAGAATCACATCACATATTTGATGATCCTGTCGCCAGGTACGATGAAGAAATTGGGTTTGAAGACATGATTGGTGATGCATTCAATGGGGAGCCATCAACAGCATACAGGATGAGTGATCTCCCAGACACAACTCTTGGGTCACTCTTGTCATCTCTGATGCAGAACTGTGAGCCTCCCCAGAGGAGGTACCCTTTGGACAAGGGTATTGCCCCTCCCTGGTGGCCCACTGGGCAGGAGTGGTGGTGGGCTGAGATGGGCTTTACAGTGGACCCAGGCCCTCCTCCCTACAAGAAGCCCCATGACCTGAAGAAGGTGTGGAAGATGTGTGTGCTCACTGCAGTCATCAAGCACATGTCCCCTGACATAGCAAAGATCAGCAACATTGTGCGTCAGTCTAGGACCCTTCAGGACAAGCTCACTGCTAAAGAAACTGCCATTTGGAGTGGTATTGTGAAGCGTGAGGAGTCCCTTGCTAGAAGATTGTACCCTTACTTGTTCCAAACTCCCCCACCAACTATTGGTTATGATAATGTTGGAAATTTTCTTGGGGTGGAAAATGGTAACTACCCACCACCAACCACTAATATTGCTTATAATAATAACATTCCTCTTGCAAATGGTGATAGAACTTTCCTTGGGGGGCAACAAAGTGACCTTAGTGCTGCAAGAAATTTTCCTGGGGGGCAGAATAACATACCACAAGCCACCAATGTTGCTAATGGTGGTTCTTGGAGCTTTCTTGGCGGCCAGAATAACCAATCAACTGATGCTACTAGAATTCTTCTCGGGAGCCAAAGTAAATCTCCACCAACCACCAATGTTGCTAATGGTGGAGCTAGAGATTTCTTTGTGGGGCAGTTCGATCCACCAACACCAACAAGCAATTTGGTTGATGGTGGACTCAGAGATTTTCTGGCGGGCCAATATAACTCACCACCACCACCAAGCAATGTTGCTATTGGTAATAGCAATAATGATAATATGGTTACAATGATGAACAATGGCATTGTTATGCCACTAGATCATGCTTCTGAGAAGAGAAAGGCTGGGGCTGTTCAAGGTATTACATTTCCTCATGAGGACTATTCCTGTCATAGCATAGAGTGCCCTTATCACGAGACTGGCCTTGGGTTCAGTGACAGGAATATGAGGAACAATCATCAGCTGACATGTCAACACAGAAACAACAATCCTGTGCAAGTGGTTGGGGTTGGAGGGTTAGTGCCTTCTCAGCTTGGCAATCCTAATGTAAATCTGCCCCTTGGTCAATCTACCAACATTGCTCAACCAGTTATGAATCAAAATCAAACTTTCACTGCTGGTCAACCTAGGCACACTCCAGCACCAGCTCTGAATCAAAATCAGATTCTTGGTATTATCAGTGACAACGCTGGAGAAATGGGGTCTGGCGTGATGCACAACATCAATGTGCAGCAGAAGCAACCCACAGGTGTTGGCAGCAGCATGAATGTTCCTCCACTTGCAGGCCAAAACCAGCAGGTGCATACTGTTCAGACTCGAGTGAACAATAATAGTTCTTTGATGGAAGGGTTTGTGAACAATAATAATTTCTTTGATGGAAGGATTTGTTTGGACAAGGATATCTTTGGCAACAACATGTCTGTTCCTTCTATGGCAAGCAAAAACCAGCAGCAGCTGCAAAATGTTGGAGGTGACAGTGGATTTAGTTTGAATGCTGAAGTGTCCAATATTTCCCCAGGGCATGGCAATTTGTCAAAATCAATATTAGATTCTCCCTTTGAATGGGAAGCAAACAATTCCCAACCTGACTTTTTGGACTCTCCTTTGTTGACAACACCAGACCCGGAACTCCTTTGGCCATACAGTTAG 2301 0.4585 MDSMDDYKMSGVDSGADYDCDALMRNVEEEMRVGEGSEEEEEEEEITIEELETRMWRDRMMLRKLKEKKREKEKGETLEMMKKKALSRAQDTVLKNMLKMMEVCGVRGFVYGIVPEKGKPMSGASDNLRGWWKDRVKFDRNGPAAMLSVQESHHIFDDPVARYDEEIGFEDMIGDAFNGEPSTAYRMSDLPDTTLGSLLSSLMQNCEPPQRRYPLDKGIAPPWWPTGQEWWWAEMGFTVDPGPPPYKKPHDLKKVWKMCVLTAVIKHMSPDIAKISNIVRQSRTLQDKLTAKETAIWSGIVKREESLARRLYPYLFQTPPPTIGYDNVGNFLGVENGNYPPPTTNIAYNNNIPLANGDRTFLGGQQSDLSAARNFPGGQNNIPQATNVANGGSWSFLGGQNNQSTDATRILLGSQSKSPPTTNVANGGARDFFVGQFDPPTPTSNLVDGGLRDFLAGQYNSPPPPSNVAIGNSNNDNMVTMMNNGIVMPLDHASEKRKAGAVQGITFPHEDYSCHSIECPYHETGLGFSDRNMRNNHQLTCQHRNNNPVQVVGVGGLVPSQLGNPNVNLPLGQSTNIAQPVMNQNQTFTAGQPRHTPAPALNQNQILGIISDNAGEMGSGVMHNINVQQKQPTGVGSSMNVPPLAGQNQQVHTVQTRVNNNSSLMEGFVNNNNFFDGRICLDKDIFGNNMSVPSMASKNQQQLQNVGGDSGFSLNAEVSNISPGHGNLSKSILDSPFEWEANNSQPDFLDSPLLTTPDPELLWPYS 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01974 766 Gene3D - 182 315 IPR023278 GO:0003700|GO:0005634
Spst5g01974 766 Coils Coil 24 68 - -
Spst5g01974 766 Gene3D - 76 152 IPR023278 GO:0003700|GO:0005634
Spst5g01974 766 FunFam Ethylene insensitive 3-like 1 178 314 - -
Spst5g01974 766 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 28 321 IPR006957 GO:0003700|GO:0005634
Spst5g01974 766 Pfam Ethylene insensitive 3 49 305 IPR047091 GO:0003700
Spst5g01974 766 SUPERFAMILY DNA-binding domain of EIN3-like 185 308 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01974 Spst-Chr5 55251697 55255052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01974 512 614 EIL Transcription Factor Family AT2G27050 29.204 6.32e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Spst5g01974 EIN3 2.1e-99 No_clan