Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01972 ATGGAAGAAGAGAGGGTAGAAAGTCCATTATTGTTGAAGAAAAGATACTATGAGAACTGTCCTGGTTGTAAGGTGGATCAAGCCAAGGAGCTGAAAAATGATGCTTCCTTCATAAATCTTTCTTTTATATGGTTGGCTGTGTTGTGTGGCACGTTGCCTGTAGCATCACTTTATCCCTTCGTTTATTTCATGGTGAAAGATTTTAATATTGCAGATACAGAAGAAGATATAAGTACCTATGCTGGTTATGTGGGATCATCAATGATGCTTGGTAGGGCTTTGACATCCATATTGTGGGGTATGATTTCTGATCGCTATGGTAGAAAACCTGTTATCATTATTGGGATTATCGCTGTTGTCATTTTCAACACATTATTCGGTCTTAGCACCAGTTTTTGGATGGCTATTAGCATGAGATTTCTTCTTGGAAGTTTAAATGGTTTACTTGGACCAATAAAGGCTTATGCCACTGAAATTTGCAGAGAAGAGGACCAAGCTCTAGGACTCTCAACAGTGGTTGCCGCTTGGGGAGTAGGTTTAGTCATAGGTCCAGCATTGGGAGGTTATTTGGCTCAGCCAGTGTTGAAATACCCACATGTATTTCCAAAGGAATCCTTTTGGGATAGGTTTCCATACTTCTTGCCGTGCTTCATAATATCAGCTTTTGCGTTTGTATCAGCAATTGCTTGCATTTGGCTCCCGGAGACCCTTCACAAACACAATGATAGCATTGAGTCCACCATAAATGTTGAAGCTTTGGAAATACAAAGTTGTGGGGAAGACAAAGATAAGATGATCCAGAAAGATGAAAGCATCTTTCAAAATTGGCCCTTAATCTCATCCATAATTGTTTACTGTGTTTTTTCACTACATGATGTTGCTTATCAAGAGGTTTTCTCATTGTGGGCTCTCAGTCCTGTTAGATTGGGTGGTTTGAACTTTTCAAGTGATCATGTTGGTATTGTTCTAGCAATTTCAGGTGTTGCTATTATAATCTACCAGCTTACCCTTTATCGATCAGTGGAAAAAGCTTTTGGACCTCTCACTCTAGTAAAGATCACAGGGGTTTTATCCATACCTCTCTTGCAATGTTATCCTTTCATGACTATGTTGTCAGGCTTCACACTAGACCTAGTGATCAATATTGTCTCCATCCTCAAGAATTTAATGATCGAGACAATTGCAACTAGCTTATTCGTTCTGCAGAATAAAGCTGTGGACCAACATCAAAGAGGGACAGCTAATAGCATTGCCATGACTGGTATGTCAGCATTTAAAACAATTGGTCCTGCTAGTGCTGGTGCCTTATTATCTTTGTCGCAAAAGCATATAAATGGTTCTTTTCTGCCAGGCAACCATATAGTGTTCCTCGCCCTGAATGTTGTTGAAGGACTTGCGGTTCTGTTGATGTTCAAACCATTCTTGAGTGTAAAGAGTAAAACACCATCAGAGCAGTTACAGCAATGTTAA 1470 0.3973 MEEERVESPLLLKKRYYENCPGCKVDQAKELKNDASFINLSFIWLAVLCGTLPVASLYPFVYFMVKDFNIADTEEDISTYAGYVGSSMMLGRALTSILWGMISDRYGRKPVIIIGIIAVVIFNTLFGLSTSFWMAISMRFLLGSLNGLLGPIKAYATEICREEDQALGLSTVVAAWGVGLVIGPALGGYLAQPVLKYPHVFPKESFWDRFPYFLPCFIISAFAFVSAIACIWLPETLHKHNDSIESTINVEALEIQSCGEDKDKMIQKDESIFQNWPLISSIIVYCVFSLHDVAYQEVFSLWALSPVRLGGLNFSSDHVGIVLAISGVAIIIYQLTLYRSVEKAFGPLTLVKITGVLSIPLLQCYPFMTMLSGFTLDLVINIVSILKNLMIETIATSLFVLQNKAVDQHQRGTANSIAMTGMSAFKTIGPASAGALLSLSQKHINGSFLPGNHIVFLALNVVEGLAVLLMFKPFLSVKSKTPSEQLQQC 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01972 489 FunFam Protein ZINC INDUCED FACILITATOR-LIKE 1 38 470 - -
Spst5g01972 489 PRINTS Tetracycline resistance protein signature 343 363 IPR001958 GO:0022857
Spst5g01972 489 PRINTS Tetracycline resistance protein signature 169 191 IPR001958 GO:0022857
Spst5g01972 489 PRINTS Tetracycline resistance protein signature 112 136 IPR001958 GO:0022857
Spst5g01972 489 ProSiteProfiles Major facilitator superfamily (MFS) profile. 39 478 IPR020846 GO:0022857
Spst5g01972 489 SUPERFAMILY MFS general substrate transporter 39 474 IPR036259 -
Spst5g01972 489 CDD MFS_SLC46_TetA_like 43 472 - -
Spst5g01972 489 Gene3D MFS general substrate transporter like domains 39 470 IPR036259 -
Spst5g01972 489 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 39 471 - -
Spst5g01972 489 Pfam Major Facilitator Superfamily 43 430 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01972 Spst-Chr5 55239485 55243764 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01972 5 55239485 55243764 Spst11g00026 11 495916 503110 PCT