Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01962 ATGCAAATTTTAAGGTACTATTATGGAAAATTCACACATCATAATCTTTTGCATTCTACAGGTTTCATAAAGGAGAAGATAAAGATAAATTTTGTGAGATCTTCTCGAGTGGTGAGGGTTACAGGAGAACGAACACTGGGAGGCAACAGAATAAGCAACTTCGAGCAAACATATCCCGTTCCAGAAAATTGCGAGGTGGAGAAACTTCACGGTAAGTATGAGCTTGGAACTCTCATTGTTACCATGCCAAAGAAGCCCTTTGCTGTTTCACAAGTTTCTCCCAAATCACCTCACCAAATACCTCCAATTCCACCACTTAGTTCTTCTGAGAAACCTGTGCTTGATCTATCAAAGCCTAAAGAAGTAGCCATGCCTCCAAAATCTCCACTCCCTAGAATGGAACTAAGAGAAAAACCTATTGGAGATAAGTCACCAAGGCCTAAAAATGTTCAAGAGGAAACCATGTTGAAACCCACACCAATTTTTGCTTCAACCCCATTAAAGGAAATAGGTAAATCTCAAAAAGGTCAAGGGGAAATTGAGCCAAAATCCACCTCAGCAATAAGGGGTCATGACAGAAAAATACAAGATAAAAATGTGGTGGAAAATAAGCAAAATGACATTGCAACATATATAGAAAAAGTGAAGAAGAGAATACATGAAAAGGAAGATGAAGCAGATCGGAATAACCCTAATGAGAGAATGAAGTCAGGTCAGAGATACATTAATCACGATGAGGTTTGGAAAGGAGCAGAGATATTGAAGACAAGACCAAAGGAAGGTGAAGGGTCCACTGCTACAAAAGAAAAGGGAAAAGAAAGCACCCACAGAAGCATCGACAAAGGAAAGAGAAAAGAGGAGGAGGTGTACACAATAGAGAAGGGAATAAAAGAAGTGGTTGCTTCAGCTTCAGAGATAGTGACTAAAATTGGAGAAGGAAACTTGAATGATGAAGAAAAGCCTTTGGTTGCAAACATGGGTGCTGCAATTCTTGTGATTATGGCATTGGGAGCTTACGTGACTTACAAGTTTACCTCTTCTAGCAGAGCATGA 1053 0.396 MQILRYYYGKFTHHNLLHSTGFIKEKIKINFVRSSRVVRVTGERTLGGNRISNFEQTYPVPENCEVEKLHGKYELGTLIVTMPKKPFAVSQVSPKSPHQIPPIPPLSSSEKPVLDLSKPKEVAMPPKSPLPRMELREKPIGDKSPRPKNVQEETMLKPTPIFASTPLKEIGKSQKGQGEIEPKSTSAIRGHDRKIQDKNVVENKQNDIATYIEKVKKRIHEKEDEADRNNPNERMKSGQRYINHDEVWKGAEILKTRPKEGEGSTATKEKGKESTHRSIDKGKRKEEEVYTIEKGIKEVVASASEIVTKIGEGNLNDEEKPLVANMGAAILVIMALGAYVTYKFTSSSRA 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01962 350 MobiDBLite consensus disorder prediction 167 195 - -
Spst5g01962 350 CDD ACD_sHsps-like 21 84 - -
Spst5g01962 350 MobiDBLite consensus disorder prediction 253 287 - -
Spst5g01962 350 MobiDBLite consensus disorder prediction 89 152 - -
Spst5g01962 350 MobiDBLite consensus disorder prediction 131 150 - -
Spst5g01962 350 Gene3D - 16 93 IPR008978 -
Spst5g01962 350 Pfam Hsp20/alpha crystallin family 22 88 IPR002068 -
Spst5g01962 350 SUPERFAMILY HSP20-like chaperones 21 88 IPR008978 -
Spst5g01962 350 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 1 103 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01962 Spst-Chr5 55140008 55141060 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01962 5 55140008 55141060 Spst11g00058 11 1000734 1003346 PCT