Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01719 ATGGCATCTTCGAGCGCAGCCGGTGCTGGATCCACTGATCCCGCTGCTGCGAGAAGAAACACCAAGCGACCCAAGTACTCAAAGTTTACCCAGCAAGAACTTCCAGCTTGTAAGCCAATTCTCACGCCACGAGCGGTTATTTCGGCATTCTTGCTTGTCAGCATTGTATTTGTTCCCATTGGAGTTGCTTCGCTAATTGCTTCAAGGAAGGTTGTTGAAATTGTTTTTAGGTATGAATCAACATGCATTCCGAATAATGTGACTGACAAGGTAGCATACATTCAGAGTTCCGCCGACAAAACATGCAACATAACTCTACATGTGAACAAGCATATGAAGTCACCTATTCATGTCTACTATCAGCTTGACAACTTCTACCAGAATCATCGCCGATATGTTAAAAGCCGGAGTGATGAACAATTGAGGGATCGTAGTGAAGAGAACTCCACAAGTACGTGTAAGCCTGAAGATACAGCCAATGGAAAGGCAATTGTACCTTGTGGTCTTATAGCTTGGAGTTTATTCAATGACACATACAGCTTTTCCCGTGTGAACCAGAGTTTGAAAGTGAACAAGGAGGGTATCTCTTGGAAGAGTGATAGAGAGCACAAATTTGGAAAAGATGTTTTCCCTAGAAACTTCCAGAGTAGTGCAATTAAAGGTGGTGCAAGCCTCAATGAATCAATACCATTGAGTAAGCAGGAGGATCTTATTGTCTGGATGCGAACTGCTGCTTTGCCTACTTTTAGGAAATTGTATGGAAGGATAGAGGAGGATCTGAATGAAGGTGATAGCATAAATGTAATACTGAAAAATAATTACAACACATACAGTTTTAATGGCAAGAAAAAGCTTGTACTGTCAACTACTAGCTGGCTTGGTGGGAAGAATGACTTCCTGGGGATTGCTTATCTCACAGTTGGAGGATTGTGCTTCTTTTTGGCTTTGTCTTTTACCATTGTATATTTTGTCAAGCCAAGGCAACTTGGAGATCCTTCATATTTGTCATGGAATATGAATCCAGGAGGGCACTGA 1035 0.4193 MASSSAAGAGSTDPAAARRNTKRPKYSKFTQQELPACKPILTPRAVISAFLLVSIVFVPIGVASLIASRKVVEIVFRYESTCIPNNVTDKVAYIQSSADKTCNITLHVNKHMKSPIHVYYQLDNFYQNHRRYVKSRSDEQLRDRSEENSTSTCKPEDTANGKAIVPCGLIAWSLFNDTYSFSRVNQSLKVNKEGISWKSDREHKFGKDVFPRNFQSSAIKGGASLNESIPLSKQEDLIVWMRTAALPTFRKLYGRIEEDLNEGDSINVILKNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLALSFTIVYFVKPRQLGDPSYLSWNMNPGGH 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01719 344 PIRSF Lem3/Cdc50 1 340 IPR005045 GO:0016020
Spst5g01719 344 PANTHER CELL CYCLE CONTROL PROTEIN 50 18 337 IPR005045 GO:0016020
Spst5g01719 344 MobiDBLite consensus disorder prediction 1 28 - -
Spst5g01719 344 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 65 328 IPR005045 GO:0016020
Spst5g01719 344 MobiDBLite consensus disorder prediction 136 151 - -
Spst5g01719 344 MobiDBLite consensus disorder prediction 136 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01719 Spst-Chr5 52560586 52567809 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01719 5 52560586 52567809 Spst5g01719 5 52560586 52567809 ECH
Spst5g01719 5 52560586 52567809 Spst11g00434 11 25061006 25064643 PCT