Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01714 ATGGTGAGGGGAAAGAAAAGGGATTTCGGCTGTGACTTGGTGAGGGTGGAGGGAGCTACTAGTGAAGGTGGAAAAATGTTATTGAGGCTGGAAAGCGGCTCGGCCAGTGGTGGCTCACGATGGTTGGAGGTGGGGGTTAGATTGGGGTTGAGTGAAGGTTGGGCACGACTGGCGGCTAGGGCTGGATGGAGGATGGCCGTGGTGGTGGCCTGGCGATTTGGGGGTCGTAGGTTAGTTGAAGAAGATGGAATTGGTGAGAGGGAATGGAGGAAGCGGTGGGCAACCAACATGACGGAGAGTGGTAGTGGCGGAAACCGTCGGAGGGAACCGCTGCTAGAGTCGCCGGAGGGAGAGGTTGCAAAAGCTCCATGGAGACTTAACGTGCAGGAGTTTCGTTTGCCAAACCGAACTGATGAGCATCACCATCACCGTTCCTTCTCTTTCCGTGGTCTTCTCCGCAAGCCCAGGAGACAAGTCAAAGTGGCAGAGTATTACAAGAAACAGGAGCGACTCCTTGAAGGATTTACTGAGATGGAGACTATGACTGAAACGGGTGGTTTCCCAGGAGCTCTCACTGAGGATGAAATGAAGCAACTAGCCAAGAGTGAGAGGATGGCTGTTCAAGTGTCAAATATATGTAACTTGGTGCTGTTTGCAGCAAAGGTTTATGCTTCAGCTGCGAGCAGGTCATTGGCAGTCATTGCCTCAACCATGGATTCCCTCTTGGATCTCTTATCAGGGTTCATATTGTGGTTTACTGCTCATGCCATGAAAAACCCAAACCAATATCACTATCCAATTGGAAAGAAACGCATGCAACCAGTGGGTATCATTATTTTTGCATCTGTGATGGCTACCTTGGGGTTGCAGATTTTGATTGAATCAGGCCGACAACTTATTTCCAAGGCTAAGCCTGATATGGATCCAACAAAACTGCACTGGATGATCGCTATTATGGTGTTTGTGACTGTAGTGAAGTTCATTCTGATGGTCTATTGTCGTAGATTTAAAAATGAAATCATTAGAGCGTATGCACAAGATCACCTTTTTGATGTCATTACTAATTCTGTTGGATTAGCTGCAGCTGTTCTGGCTGTCAAGTTCTACTGGTGGATTGATCCTACAGGAGCCATTATTATTGCATTGTATACAATTAATACATGGGCCAAGACTGTCATTGAGAATGTTGGTTCACTCATTGGAAAAACAGCACCACCTGATTTTCTGGCAAAGTTAACTTACCTCATATGGAATCACCATGAGCAGATTAAGCACATAGATACTGTTAGAGCATACACCTTTGGTGAACATTACTTTGTGGAAGTTGACATTGTGTTACCAGAAGACATGGTTCTCCATCAAGCACACAACATTGGTGAGACACTCCAAGAGAAGCTAGAGCAACTTCCAGAAGTTGAGAGGGCTTTTGTGCACATAGATTTTGAGTTCACTCACAGGCCAGAGCACAAGGCCATGGTGTGA 1482 0.4656 MVRGKKRDFGCDLVRVEGATSEGGKMLLRLESGSASGGSRWLEVGVRLGLSEGWARLAARAGWRMAVVVAWRFGGRRLVEEDGIGEREWRKRWATNMTESGSGGNRRREPLLESPEGEVAKAPWRLNVQEFRLPNRTDEHHHHRSFSFRGLLRKPRRQVKVAEYYKKQERLLEGFTEMETMTETGGFPGALTEDEMKQLAKSERMAVQVSNICNLVLFAAKVYASAASRSLAVIASTMDSLLDLLSGFILWFTAHAMKNPNQYHYPIGKKRMQPVGIIIFASVMATLGLQILIESGRQLISKAKPDMDPTKLHWMIAIMVFVTVVKFILMVYCRRFKNEIIRAYAQDHLFDVITNSVGLAAAVLAVKFYWWIDPTGAIIIALYTINTWAKTVIENVGSLIGKTAPPDFLAKLTYLIWNHHEQIKHIDTVRAYTFGEHYFVEVDIVLPEDMVLHQAHNIGETLQEKLEQLPEVERAFVHIDFEFTHRPEHKAMV 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01714 493 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 121 490 - -
Spst5g01714 493 Pfam Dimerisation domain of Zinc Transporter 406 480 IPR027470 -
Spst5g01714 493 Pfam Cation efflux family 209 399 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Spst5g01714 493 MobiDBLite consensus disorder prediction 95 116 - -
Spst5g01714 493 FunFam Metal tolerance protein 11 402 482 - -
Spst5g01714 493 NCBIfam cation diffusion facilitator family transporter 207 480 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Spst5g01714 493 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 404 480 IPR036837 -
Spst5g01714 493 Gene3D Cation efflux protein transmembrane domain 204 399 IPR027469 -
Spst5g01714 493 Gene3D Cation efflux protein, cytoplasmic domain 403 481 IPR036837 -
Spst5g01714 493 SUPERFAMILY Cation efflux protein transmembrane domain-like 202 401 IPR027469 -
Spst5g01714 493 FunFam Metal tolerance protein 11 206 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01714 Spst-Chr5 52444541 52452535 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01714 5 52444541 52452535 Spst5g01714 5 52444541 52452535 ECH
Spst5g01714 5 52444541 52452535 Spst11g00438 11 25088571 25091985 PCT