Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01693 ATGAAGCACTTGATCCGTCGCCTCTCGCGCGTAGCCGACTCCTCCAATTACACGCTCCTCCGCTCCGACTCCACCTCCTCCACCTCGCGCAGCTGCCGGCGGCGCCAACGGGCCGACTCCTTGCGCCTCGCCAAGATCCGCCGCTCCTCCGCGGTGGTGCCGGAGGGGCACGTGCCGATCTACGTCGGCGACGAGATGGAGCGGTTCGTGGTCTGCGCCGAACTCCTCAACCACCCTGTCTTTGTCAAACTACTCAACGAATCCGCGCAGGAATACGGCTACGAACAGCAAGGCGTGCTCCGCTTGCCGTGCCGCGTCTTCGACTTCGAACGCGTGCTCCACGCGCTCCGCCTCGGCCTCGACGCGCGTGACGTCGCCCAGCTAGTTAACTTCTCGCCGGAAGAATTCTCCTGA 414 0.6473 MKHLIRRLSRVADSSNYTLLRSDSTSSTSRSCRRRQRADSLRLAKIRRSSAVVPEGHVPIYVGDEMERFVVCAELLNHPVFVKLLNESAQEYGYEQQGVLRLPCRVFDFERVLHALRLGLDARDVAQLVNFSPEEFS 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01693 137 Pfam Auxin responsive protein 8 116 IPR003676 GO:0009733
Spst5g01693 137 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 39 113 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01693 Spst-Chr5 52082360 52082773 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01693 5 52082360 52082773 Spst5g01693 5 52082360 52082773 ECH
Spst5g01693 5 52082360 52082773 Spst11g00485 11 26612468 26612839 PCT