Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01627 ATGTTAATTCTAGTGGGAAACGTGCAGGGAACAATGAGTTCTCTTGCGTCTCCAGTGAGTTTGGGGAGCCTCATGGGTGTGAGTTCCTCTGGAAGGTCTCATTCTTTGGTGAGGAGGGTCTCTCTTTCCAGAGGGAATTGTAAGGGGAGAAAGAGATGGCATTGTTTATCATTGTCTGTGTGTAGATATTCAGTGACCGCAACTGATTTTATTGCTGACCAAGGGAACTCAGTGTCTCTTGATTCTAACAGTAGTAGTAGTAGTAAGGGTGGTGATGATGATGGTGCTGGCTTTGTGCTTAAGCCTCCTCCAAAGCCTGTGTTGAAGTCCCCAGAGAATAAGGGTGATCCCATTTTGGGGCCCTCAAGGACTACTGGGGATGTGGAAGAGAGAAATAAGGTTATTGAATCACTTGGGGAGGTGTTGGAGAAGGCGGAAAAGCTGGGGAATTCTAAGGTGAATGGTGATAAGAATAATGGTTCTGTGAATAAACCAGTTAGGAGTAATGCTGGTGCTAGTCCTAGGGCTGAGAAACCGGTGAATTCAGCAACAGCTCAGAAGTCTAAAACCTTGAAGAGTGTATGGCGTAAAGGGGACACTATTGCATCAGTGCAGAAGGTTGTGAAGGAAGTACCAAAGCCTAATTATAACAAGAATGAAGAGGAGAAGTCTCAAACTAGGAGAGGGGAGAAGGTGGTTGCTCAAACTCGTGCTCCCCAACCACCTTCGAAACCTCAACCACTGTCGAAACCTCAACCACCGACGAAACCTCAACCGGCATTGCTATCAAAACCTTCTATAGCTCCCCCACCTGTCAAAAAACCTGTTGTCTTGAGGGACAAGGGAGCAGCTGAAACATCAGTTCAATCTAAAGAAAAGAAGTCACCCATCTTGATTGACAAGTTTGCTTCCAAGAAACCAGTAGTTGATCCTCTAATTGCGCAAGCAGTTCTAGCCCCTCCAAAACCAGGAAAGGTGCCTCCCCCGGGAAAGTTTAAAGATGATTTCCGGAAGAAAGGTGCTCTGGCTGGGAGTGGACGAAGAAGACGAATGTTGAATGATGAAGATGATACTGATGTGATTAATGATGCATCAGAACTTGATGTGTCTATTCCTGGTGCCACAACAGCAAGAAAAGGAAGGAAATGGAGCAAAGCTAGTCGAAAGGCAGCAAGACTCCAGGCTGCCAGGGATGCAGCTCCTGTCAAAGTAGAAATTCTAGAGGTTGGTGAGACTGGTATGCTGGTGGAGGAATTGGCCTACTGTTTGGCAACCAGTGAAGGTGAAATCCTTGGTTATCTATACTCCAAGGGGATTAAACCAGACGGGGTACAAACTCTAGATAAAGATATGGTAAAGATGATTTGTAAAGAGTATGATGTTGAAGTCATAGATGCTGACCCGGTCAAAGTTGAAAGTTTAGTGAAGAAAAGAGAAATCCTTGACGAAGATGACCTCGATAAACTTAAAGATAGGCCTCCTGTTATCACCATTATGGGCCATGTAGATCATGGCAAGGTTAGTACTCTACAACCCTTTTGGATTATATACGGAAGACCAAGTTGTTTCAATGCTGATTGGACTATGGTAGCTGCTTCTGAAGCTGGTGGGATCACACAAGGAATTGGGGCCTATAAAGTGCAAGTTCCTGTTGATGGCAAGAAGTTGCCCTGTGTTTTCCTTGACACTCCTGGACACGAGGCATTTGGAGCCATGAGAGCTCGTGGAGCAAGTGTAACAGACATTGCTATTATTGTTGTGGCTGCTGATGATGGAATTCGTCCTCAAACAAATGAAGCTATTGCTCATGCCAAAGCAGCGGGAGTACCCATAATCATTGCTATAAACAAGGCATGTCAACATAATATAGATAAAGATGGAGCAAATCCAGAACGAGTCATGCAAGAGCTTTCTTCAATTGGTTTAATGCCAGAAGACTGGGGTGGTAACATCCCGATGGTTCCGATAAGTGCTCTTAAAGGGAAGAATGTAGATGATCTTTTGGAAACTGTTATGCTTGTTGCTGAGTTGCAAGAGCTGAAAGCTAATCCTGATAGAAGTGCGAGGGGAACAGTCATTGAGGCAGGGCTAGATAAATCAAAGGGACCATTTGCTACTTTTATTGTGCAGAACGGCTCCCTCAGACGGGGTGATATTGTAGTTTGTGGAGAAGCTTTTGGAAAGGTGCGGGCTTTATTTGATGATGGTGGAAAGCGTGTTGATGAAGCTACACCTTCTATACCTGTACAGGTTATTGGATTGAATAATGTTCCTATTGCTGGTGATGAATTTGAGGTTGTTGAATCCCTTGATAGTGCACGTGAAAAGGCAGAGGCTCGTGCTGAGTCATTGCGAAATGAGCGTATTTCGGCAAAGGCAGGAGATGGCAAGGTCACCCTTTCTTCCTTAGCTTCAGCAGTTTCCTCAGGAAAGCTGTCTGGACTTGACTTGCATCAACTTAATATTATTTTGAAGGTTGATTTTCAGGGATCTATTGAAGCTGTCAGAAAAGCTCTGCAGGTGCTACCACAAGACAATGTCACACTGAAGTTTTTGTTGGAAGCAACAGGTGATGTAAACACTAGTGATGTGGACCTTGCAGTTGCAAGCAAGGCCATCATTTTGGGATTTAATGTGAAAGCACCAGGCTCTGTGAAAAGCTATGCAGATAACAAAGTGGTTGAGATTAGATTATACAGAGTTATTTATGAATTAATTGAGGATGTACGAAATGCAATGGAAGGGCTCCTAGAACTTGTTGAGGAACAAGTAACAATTGGTTCAGCGGTAGTACGAGCTGTATTCAGCAGTGGCAGTGGTCGTGTTGCTGGATGCATGGTTACAGAAGGAAAGGTATTAAAAGATTGTGGTATTCGAGTCAAGAGGAAGGGAAAAATAGTCCATGTTGGAATTATTGATTCTTTGAGACGAGTGAAGGAAATTGTTAAAGAGGTAAATGCTGGTCTTGAGTGTGGAATTGGGTTGGAAGACTTTGATGATTGGGAAGAGGGTGACATTCTTGAAGCCTTCAACACAGTTGAGAAGAAGAGGACCCTTGAAGAGGCTTCAGCATCAATGGCAGCTGCTGTGGAGGGAGTTCCAGTTGAAAAGACGTATTTCTCTCCAATTGATGTTATGACATTGGGGAGAGGTAACAACAATTCCCTCATCACTCACTATATTGAAACTGAGGTTGCCACTGCTGAAGATCTGAGTTCAAAATGA 3225 0.4397 MLILVGNVQGTMSSLASPVSLGSLMGVSSSGRSHSLVRRVSLSRGNCKGRKRWHCLSLSVCRYSVTATDFIADQGNSVSLDSNSSSSSKGGDDDGAGFVLKPPPKPVLKSPENKGDPILGPSRTTGDVEERNKVIESLGEVLEKAEKLGNSKVNGDKNNGSVNKPVRSNAGASPRAEKPVNSATAQKSKTLKSVWRKGDTIASVQKVVKEVPKPNYNKNEEEKSQTRRGEKVVAQTRAPQPPSKPQPLSKPQPPTKPQPALLSKPSIAPPPVKKPVVLRDKGAAETSVQSKEKKSPILIDKFASKKPVVDPLIAQAVLAPPKPGKVPPPGKFKDDFRKKGALAGSGRRRRMLNDEDDTDVINDASELDVSIPGATTARKGRKWSKASRKAARLQAARDAAPVKVEILEVGETGMLVEELAYCLATSEGEILGYLYSKGIKPDGVQTLDKDMVKMICKEYDVEVIDADPVKVESLVKKREILDEDDLDKLKDRPPVITIMGHVDHGKVSTLQPFWIIYGRPSCFNADWTMVAASEAGGITQGIGAYKVQVPVDGKKLPCVFLDTPGHEAFGAMRARGASVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPIIIAINKACQHNIDKDGANPERVMQELSSIGLMPEDWGGNIPMVPISALKGKNVDDLLETVMLVAELQELKANPDRSARGTVIEAGLDKSKGPFATFIVQNGSLRRGDIVVCGEAFGKVRALFDDGGKRVDEATPSIPVQVIGLNNVPIAGDEFEVVESLDSAREKAEARAESLRNERISAKAGDGKVTLSSLASAVSSGKLSGLDLHQLNIILKVDFQGSIEAVRKALQVLPQDNVTLKFLLEATGDVNTSDVDLAVASKAIILGFNVKAPGSVKSYADNKVVEIRLYRVIYELIEDVRNAMEGLLELVEEQVTIGSAVVRAVFSSGSGRVAGCMVTEGKVLKDCGIRVKRKGKIVHVGIIDSLRRVKEIVKEVNAGLECGIGLEDFDDWEEGDILEAFNTVEKKRTLEEASASMAAAVEGVPVEKTYFSPIDVMTLGRGNNNSLITHYIETEVATAEDLSSK 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01627 1074 SUPERFAMILY Translation proteins 923 1017 IPR009000 -
Spst5g01627 1074 MobiDBLite consensus disorder prediction 320 354 - -
Spst5g01627 1074 CDD mtIF2_IVc 927 1009 - -
Spst5g01627 1074 Pfam Elongation factor Tu GTP binding domain 496 673 IPR000795 GO:0003924|GO:0005525
Spst5g01627 1074 Gene3D - 816 919 IPR036925 -
Spst5g01627 1074 Pfam Translation-initiation factor 2 816 909 IPR023115 -
Spst5g01627 1074 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 186 1026 IPR015760 -
Spst5g01627 1074 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 815 927 IPR036925 -
Spst5g01627 1074 NCBIfam translation initiation factor IF-2 414 1019 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Spst5g01627 1074 MobiDBLite consensus disorder prediction 146 294 - -
Spst5g01627 1074 Hamap Translation initiation factor IF-2 [infB]. 7 1017 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Spst5g01627 1074 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 491 681 IPR000795 GO:0003924|GO:0005525
Spst5g01627 1074 CDD IF2_mtIF2_II 688 782 IPR044145 -
Spst5g01627 1074 FunFam Translation initiation factor IF-2 684 802 - -
Spst5g01627 1074 MobiDBLite consensus disorder prediction 240 272 - -
Spst5g01627 1074 CDD IF2_eIF5B 494 677 - -
Spst5g01627 1074 PRINTS GTP-binding elongation factor signature 495 508 IPR000795 GO:0003924|GO:0005525
Spst5g01627 1074 PRINTS GTP-binding elongation factor signature 559 569 IPR000795 GO:0003924|GO:0005525
Spst5g01627 1074 PRINTS GTP-binding elongation factor signature 611 620 IPR000795 GO:0003924|GO:0005525
Spst5g01627 1074 PRINTS GTP-binding elongation factor signature 575 586 IPR000795 GO:0003924|GO:0005525
Spst5g01627 1074 NCBIfam small GTP-binding protein domain 493 671 IPR005225 GO:0005525
Spst5g01627 1074 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 485 684 IPR027417 -
Spst5g01627 1074 MobiDBLite consensus disorder prediction 75 131 - -
Spst5g01627 1074 FunFam Translation initiation factor IF-2 921 1018 - -
Spst5g01627 1074 Gene3D - 488 683 IPR027417 -
Spst5g01627 1074 Coils Coil 767 794 - -
Spst5g01627 1074 FunFam Translation initiation factor IF-2 816 920 - -
Spst5g01627 1074 Gene3D Translation factors 684 800 - -
Spst5g01627 1074 MobiDBLite consensus disorder prediction 328 354 - -
Spst5g01627 1074 MobiDBLite consensus disorder prediction 75 91 - -
Spst5g01627 1074 Gene3D Translation factors 921 1018 - -
Spst5g01627 1074 MobiDBLite consensus disorder prediction 213 230 - -
Spst5g01627 1074 MobiDBLite consensus disorder prediction 152 168 - -
Spst5g01627 1074 FunFam Translation initiation factor IF-2 488 683 - -
Spst5g01627 1074 ProSitePatterns Initiation factor 2 signature. 970 992 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Spst5g01627 1074 SUPERFAMILY Translation proteins 684 768 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01627 Spst-Chr5 51027720 51035706 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01627 492 907 Eukaryotic Initiation Factors Gene Family AT1G76810 28.364 1.09e-23 106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01627 5 51027720 51035706 Spst5g01627 5 51027720 51035706 ECH