Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01625 ATGGAAGAACCTACATTGTTGTTCCCAGACACAGACCTCGATCTCAGCTTCACCAGCACCACCACCGACCGTACCAGTGCCCGAACTAGCCTCGCTCGAACCAGCAGCCTCACCCTCAGCTTCAACGACCGTATCTCCACCGTCGAGCCAACCGTCTCCGTCGTCAATCGCCGCCCCCACCGGAGCTCCGACCCCCACTGGTCCGCCATTCAGGCCGCTACCATGCTCTCTTCCGACGGACGCCTCCACCTCCGCCATCTTAAACTCCTTCGCCACCTCGGCTCCGGCAACCTCGGCCGCGTCTTCCTCTGCCGCCTCCGCGACTACGACGGCGCCAACTTCGCCCTCAAAGTCGTCGACAAAGACCTCCTCACACCCAAAAAACTCTCCCACGCGGAAACCGAGGCCGAAATCCTCCACGCGCTAGATCACCCCTTCCTCCCCACGCTCTACGCACGCATAGACGTCTCCCACTACACGTGCCTCCTCATCGACTACTGCCCCGCCGGTGACCTCCACTCTCTCCTCCGCAAACAGCCCCACCACCGCCTCCCAATCTCCGCCGCGCGTTTCTTCGCCGCCGAGGTCCTCGTCGCCCTGGAGTACCTCCACGCGCTGGGAATCGTCTACCGCGACCTCAAACCCGAAAACGTTCTCTTACGCGAGGACGGCCACGTCATGCTCTCGGATTTCGATCTCTGCTTCAAATCCGACGTGGCACCAACTCTCACACTCCAGCCCCACAACAAACCCCAACGCGCGGGCCCAACAAACGGTTGTTGCAGTTATAACCGTCACCGCTCAAAGCAAAACCATGAAACGCTCCTGGCGGAGTTCGTTGCGGAACCCGTGACGGCGTTTTCACGGTCGTGCGTGGGGACGCACGAGTACCTGGCGCCCGAACTTGTGTCGGGTAACGGTCACGGTAACGGCGTTGACTGGTGGGCTTTCGGGGTTTTCGTGTACGAGTTGCTGTACGGGACGACGCCGTTTAGGGGGTGCAGCAAGGAGGGCACGCTGCGCAATATAGCGTCGTGCAAAGACGTGAGATTCGTCCACGTGGCTGAACGAGAGGAGCCTGGGATGGTTGAGGCTAGGGATTTGATTGAGAAGCTGTTGGTGAAGGATCCAAGGAGGAGGCTAGGGTGCGCCAAGGGTGCCACTGATGTTAAACGACACCCCTTCTTTGACGGCATTAAGTGGGCGTTGATTCGGACTTACCGGCCACCGGAAGTGAAGGGGTTGGAGAGAAGGAACAAGTCGCACGTGAGCGGTCACGTGAGTCGCAAACGTGAGAGGTGGTCCTGGAAGAGACTTGGGCATGTCCTTGGGAAATATAATTTGATTTCAAACTATAGTCTTCATAATAAAAATTATTATCACTATGTTGATGATAGTTATAAGGTTAATTAA 1413 0.5761 MEEPTLLFPDTDLDLSFTSTTTDRTSARTSLARTSSLTLSFNDRISTVEPTVSVVNRRPHRSSDPHWSAIQAATMLSSDGRLHLRHLKLLRHLGSGNLGRVFLCRLRDYDGANFALKVVDKDLLTPKKLSHAETEAEILHALDHPFLPTLYARIDVSHYTCLLIDYCPAGDLHSLLRKQPHHRLPISAARFFAAEVLVALEYLHALGIVYRDLKPENVLLREDGHVMLSDFDLCFKSDVAPTLTLQPHNKPQRAGPTNGCCSYNRHRSKQNHETLLAEFVAEPVTAFSRSCVGTHEYLAPELVSGNGHGNGVDWWAFGVFVYELLYGTTPFRGCSKEGTLRNIASCKDVRFVHVAEREEPGMVEARDLIEKLLVKDPRRRLGCAKGATDVKRHPFFDGIKWALIRTYRPPEVKGLERRNKSHVSGHVSRKRERWSWKRLGHVLGKYNLISNYSLHNKNYYHYVDDSYKVN 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01625 470 PANTHER FLIPPASE KINASE 1-RELATED 30 416 - -
Spst5g01625 470 SUPERFAMILY Protein kinase-like (PK-like) 62 412 IPR011009 -
Spst5g01625 470 Gene3D Phosphorylase Kinase; domain 1 86 170 - -
Spst5g01625 470 Gene3D Transferase(Phosphotransferase) domain 1 171 237 - -
Spst5g01625 470 ProSiteProfiles Protein kinase domain profile. 87 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01625 470 FunFam Serine/threonine-protein kinase OXI1 286 414 - -
Spst5g01625 470 SMART serkin_6 87 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01625 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Spst5g01625 470 FunFam Serine/threonine-protein kinase WAG2 171 237 - -
Spst5g01625 470 Pfam Protein kinase domain 89 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01625 470 CDD STKc_phototropin_like 94 412 - -
Spst5g01625 470 Gene3D Transferase(Phosphotransferase) domain 1 288 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01625 Spst-Chr5 51006217 51007629 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01625 1 467 AGC Kinase Gene Family AT3G14370 65.560 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Spst5g01625 Pkinase 9.2e-53 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01625 5 51006217 51007629 Spst5g01625 5 51006217 51007629 ECH