Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01460 ATGTCTCTGTTTGCTGCATATTCCATTTGTGAAGTTGCCAAGGATGCAGCTGGGGTTGCAGGAAATGTCTTTGCTTTTGGCTTGTTTGTGTCTCCTATAGCCACATTTAGGAGAATTATCAGAAATGGGTCAACGGAGATGTTCTCAGGGATGCCATTTATCTATTCTCTTCTGAACTGCTTGATCTGCATGTGGTATGGCACACCTCTGATATCTGCTGATAATTTGTTGGTCACAACTGTTAATTCAATTGGAGCAGTCTTTCAGTTTGTGTATATAATCCTCTTCTTGATGTATGCTGAGAAAGCAAAAAAGGTGAGAATGATTGGATTATTGGTGGCAGTTCTTGGCGTATTTGCAATCATATTATTTGGAAGCTTGCAAATAAATGACATTCTAACGCGTCAGTTCTTTGTGGGATTCTTGAGCTGTGCATCTCTCATTTCAATGTTTGCCTCTCCGTTGTTTATAATCAAATTGGTCATTCAGACAAAGAGTGTTGAATTCATGCCATTTTATCTCTCACTTTCCACCTTCCTAATGAGCACCTCTTTCTTTCTTTATGGATTGTTCAACGATGATGCCTTCATTTATGTGCCAAATGGGATAGGAACTGTTTTGGGAATGATACAGTTGATATTATACTTCTACTATGAGAATAAATCCAGAGAGAGCTCCAGAGAACCTCTGATAGTGTCATATGCAACCCTTGATTCAGATGGTGGCCTTCTGGCCATCTTTACCAGAGAACCTGGTATGGAATATGTGGCGCGGTTAACTTGGTATATTCATGCAAGGCTTGAGGAAGTGAACAATGTTTTAAGATGGACTATTGCAAGAAAGCACACTCCTGCAGTCGTTGGTCATGGTCTAAGCTAG 879 0.4016 MSLFAAYSICEVAKDAAGVAGNVFAFGLFVSPIATFRRIIRNGSTEMFSGMPFIYSLLNCLICMWYGTPLISADNLLVTTVNSIGAVFQFVYIILFLMYAEKAKKVRMIGLLVAVLGVFAIILFGSLQINDILTRQFFVGFLSCASLISMFASPLFIIKLVIQTKSVEFMPFYLSLSTFLMSTSFFLYGLFNDDAFIYVPNGIGTVLGMIQLILYFYYENKSRESSREPLIVSYATLDSDGGLLAIFTREPGMEYVARLTWYIHARLEEVNNVLRWTIARKHTPAVVGHGLS 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01460 292 FunFam Bidirectional sugar transporter SWEET 135 228 - -
Spst5g01460 292 Gene3D - 11 106 - -
Spst5g01460 292 PANTHER RAG1-ACTIVATING PROTEIN 1 23 224 IPR047664 -
Spst5g01460 292 Pfam Sugar efflux transporter for intercellular exchange 138 222 IPR004316 GO:0016020
Spst5g01460 292 Pfam Sugar efflux transporter for intercellular exchange 18 103 IPR004316 GO:0016020
Spst5g01460 292 Gene3D - 137 230 - -
Spst5g01460 292 FunFam Bidirectional sugar transporter SWEET 15 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01460 Spst-Chr5 43053357 43056193 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01460 1 234 Miscellaneous Gene Families AT3G14770 66.809 7.40e-111 318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01460 5 43053357 43056193 Spst5g01460 5 43053357 43056193 ECH
Spst5g01460 5 43053357 43056193 Spst11g00503 11 26835162 26836472 PCT