Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01438 ATGGTGTTCACAGTGTGGTTGTGTCCTCTGGTACTAGCCTCAGCTTTTGTATGGACAGTGGCACCTTCTCCACCTTACCAAGTATGTGATTTTTCTGACGGAAAATGGGTCATTGATGAAGCCTCCTCCCACCCTCTCTATGTTGCTTCAAGGGACTGCCCTTTCATTGGCCAAGGATTTGATTGCCTAAGAAATGGCAGACCTGATAAGGAGTACCTCAAGTATCGATGGAAGCCCTCTGGTTGTGATCTTCCAAGTTTTGATGGTAAGAAGTTCTTGGAGAGAAACAAAGGGAAGAAGATAATGTTTGTGGGGGATTCCATAAGTAACAATATGTGGCAGTCACTCACTTGTTTGCTTCACGTTGCAGTCCCAAACTCACCTTACACTTCAACTACACAAACACAGCAACTTTCTGTGTTCTCATTTCCGGAGTATAAAGCTTCAATCATGTGGTTGAAAAATGGGTTCTTAGTGGATTTGGTTATTGACAAAGAAAAAGGCAGGATTTTGAAGTTGGACACCATCAGCTCTGGGGACCAGTGGAAAGGAGTTGATGTTTTGATTTTCAATTCTTACCATTGGTGGACTCACACAGGACATTCTCAAGCGTGGGATTACTTTCAAGTGGGGAGTCAATTAATCAAGGACATGGATCACATGGAAGCTTTCAAGATTGGCCTCACCACTTGGGCTAAATGGGTAGATTCTAACATTGACCCTTCAAAGACTACAGTTTTGTTTCAGGGCATTGCTGCTTCCCATGTTGACAAAAAGGGGTGCCTAAGACGAACTCAGCCAGAGGAAGGGTCAATGCCAGCATATCCTGGTGTAGACATTGTGAAGAAAGTTATAAGTAACATGAGAAATCCTGTGCAATTGCTAGACATCACTCTGCTCACACAAATGAGGAGGGATGGTCACCCCTCGATCTACACAGGGCGTGGCACTTCTTTTGATGACTGCAGTCACTGGTGTCTGGCTGGTGTTCCTGATGCTTGGAATGAAATTTTGTATGCTCTTCTGTTTGGAAATTAG 1038 0.4403 MVFTVWLCPLVLASAFVWTVAPSPPYQVCDFSDGKWVIDEASSHPLYVASRDCPFIGQGFDCLRNGRPDKEYLKYRWKPSGCDLPSFDGKKFLERNKGKKIMFVGDSISNNMWQSLTCLLHVAVPNSPYTSTTQTQQLSVFSFPEYKASIMWLKNGFLVDLVIDKEKGRILKLDTISSGDQWKGVDVLIFNSYHWWTHTGHSQAWDYFQVGSQLIKDMDHMEAFKIGLTTWAKWVDSNIDPSKTTVLFQGIAASHVDKKGCLRRTQPEEGSMPAYPGVDIVKKVISNMRNPVQLLDITLLTQMRRDGHPSIYTGRGTSFDDCSHWCLAGVPDAWNEILYALLFGN 345
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01438 345 Pfam PMR5 N terminal Domain 28 83 IPR025846 -
Spst5g01438 345 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 19 338 IPR029962 GO:0016413
Spst5g01438 345 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 84 340 IPR026057 GO:0016740
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Spst5g01438 Spst-Chr5 41041087 41042849 Dispersed/Proximal
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01438 5 41041087 41042849 Spst5g01438 5 41041087 41042849 ECH
Spst5g01438 5 41041087 41042849 Spst11g00500 11 26825152 26826815 PCT