Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01311 ATGCCTTCTTCTTCCCCCAAATCCTTCTACCCTCGCCCTCCCCCTCGCAGAACCTCCTTCCTCATCTTCGCATGCCTCTTCCTCTCCCTCTCCGCTTTCTTCTTCGCTTTCGTCAGACCCCTTTGGGACCCTCCCTGCCCCACCCGCACCCCCACATCGGTTCGAGTCCTCTGGGACCACCGTCCCACCGCCGACCGCAATTCTGAGGTTGAGAACAAACACAAAGTTATGGCCTTTGTGGGAATTCAAACCGGGTTCGGATCCGTCGGGAGGCGCCAATCTCTCAGGAGCACTTGGTTTCCTTCCGATCCACATGGACTTCAAGGATTGGAAGAAGCCACTGGCTTGGCTTTTAGGTTTGTGATTGGTAGAACGAATGATAGATCGAAGATGTCTGCACTTCAGAAGGAAGTGGCAAAATATGATGATTTCATTTTACTGGATATAGAAGAGGAGTACAGTAAGCTCCCATACAAAACGTTAGCTTTTTTCAAAGCTGCTTATGCACTTTTCGAAGCAGACTTCTATGTCAAAGCAGATGATGACATATACTTAAGGCCAGACCGTCTTTCATTATTGCTGGCAAAAGAGCGATCTCACCCTCAGACCTACATAGGATGCCTGAAAAAGGGCCCTGTTTTCACTGATCCCAAACTCAAATGGTATGAGCCACTATCTAATTTGCTTGGAAAGGAATATTTTCTTCATGCTTATGGTCCTATATATGCTCTTTCTGCCGATGTTGTCTCAAGCTTGGTAGCACTTAAGAATAACAGTTTCCGGATGTTCAGCAATGAGGATGTTACAATTGGAGCTTGGATGCTTGCAATGAATGTCAACCATGAGAATAGTCGTGAACTTTGTGCTCCAGAGTGTACTTCTACTTCAATTGCTGTGTGGGATATTCCCAAGTGTTCAGGTCTCTGTAATCCAGAAAAGAGAATGCTGGAACTCCATCAACAGGAAAGTTGTACTCAGAGTCCAACTTTGAACTCTGATGAATAG 1005 0.4627 MPSSSPKSFYPRPPPRRTSFLIFACLFLSLSAFFFAFVRPLWDPPCPTRTPTSVRVLWDHRPTADRNSEVENKHKVMAFVGIQTGFGSVGRRQSLRSTWFPSDPHGLQGLEEATGLAFRFVIGRTNDRSKMSALQKEVAKYDDFILLDIEEEYSKLPYKTLAFFKAAYALFEADFYVKADDDIYLRPDRLSLLLAKERSHPQTYIGCLKKGPVFTDPKLKWYEPLSNLLGKEYFLHAYGPIYALSADVVSSLVALKNNSFRMFSNEDVTIGAWMLAMNVNHENSRELCAPECTSTSIAVWDIPKCSGLCNPEKRMLELHQQESCTQSPTLNSDE 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01311 334 FunFam Hexosyltransferase 75 306 - -
Spst5g01311 334 Pfam Galactosyltransferase 91 284 IPR002659 GO:0006486|GO:0016020|GO:0016758
Spst5g01311 334 SUPERFAMILY Nucleotide-diphospho-sugar transferases 134 278 IPR029044 -
Spst5g01311 334 Gene3D - 67 324 - -
Spst5g01311 334 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 68 292 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01311 Spst-Chr5 26894166 26899493 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01311 3 334 Glycosyltransferase AT3G14960 70.175 3.22e-175 488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01311 5 26894166 26899493 Spst5g01311 5 26894166 26899493 ECH
Spst5g01311 5 26894166 26899493 Spst11g00552 11 27508234 27514390 PCT