Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01307 ATGAGTTTTGGATGGGTTGGTGGGTCGTGGTGTCATGCAACGGAAGAGGAGCAACAACGGGGTTGCTTCCAAGCGCAGCAGCGGAAACGGGCTTTGGTGGGTTCGGTGGAGCATGCAGGAACGACGTCGTGGAGGCAGGGGATGGTGAGAGGAGGAGGAGGGGGAGGGGGAGGAGGGGAGATAGTGGAAGTTGAAGGGGGACACATTGTGCGGTCCACCGGGCGGAAGGACCGTCACAGCAAAGTGTGCACCGCCAAAGGACCGCGTGACCGACGGGTCAGGCTATCGGCCCATACCGCCATTCAATTCTACGACGTGCAGGACAGGTTGGGCTACGACAGGCCCAGTAAGGCCGTGGACTGGCTCATTAACAAGGCCAAGTCCGCCATCGACGAACTCGCGCATCTACCTCCCTGGAAACCCACCCTCCCAACAACAAACCACCAAAACGATGACGAATCAGACAAACAAAACCCTAATAACCCAAACTCAACCACAAACACCAACGCAGACACAAACCCTGATGATGAAATTCTGAACCAGTTCAACGAGAATCTTGAGAACGATGGTGGGGGAGGAGGAGGAAGTTCGAGTTATCTTCCGTTGGATAACGACGCGATAAGGTCGTTCTTCCCGACAACGACGTCGTCGCTGATTCAGTTTCAGAGCTACCCGCCGGATTTGCTTTCGAGGACGAGCAGCCAGGATTTGCGTCTCTCGCTTCAGTCCTTGCAGGACCCGATTTTGCTCCACCATAACCAAAATGAGCACGTGCTTTTCGCCGGAGCCGGGTTTGATAACATGGTAGCGTGGAACAACATTAGTAATGCTACTAATGATACTGGTACTGGTGCTGGTGGAGGTGGAGGAGGGTTTGTGCTTAACACTCCTTCGCCTTTGTCGGGGCCGGCGACGGTGGCGTCGCCGGCAGTTGTTTTTGGCTATGGTAATGGTAATGGTCAAGGCCAGTATCTTTCTCAGAGGGGACCCCTTCAGTCCAGTAACACCCAGTCCGTTCGTGCGTGGATTGACGCGCCGTCGTTCGTTGCCGCCGCCGATCATTATCATCGGCATCACTATTTGTCACCGGTATCGGCCGCGGCGGCTTTGGTGTATCAGTCATCTCCTTCTTCGGCATTTGCGCCCGGGGGCTTCTCGGGATTCCGCGTGCCGGCACGAATTCAGGGTGAGGAGGAGCACGACGGCGTGTCCGATAAGCCGTCCTCTGCTTCCTCCGATTCTCGCCGTTGA 1251 0.5604 MSFGWVGGSWCHATEEEQQRGCFQAQQRKRALVGSVEHAGTTSWRQGMVRGGGGGGGGGEIVEVEGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLINKAKSAIDELAHLPPWKPTLPTTNHQNDDESDKQNPNNPNSTTNTNADTNPDDEILNQFNENLENDGGGGGGSSSYLPLDNDAIRSFFPTTTSSLIQFQSYPPDLLSRTSSQDLRLSLQSLQDPILLHHNQNEHVLFAGAGFDNMVAWNNISNATNDTGTGAGGGGGGFVLNTPSPLSGPATVASPAVVFGYGNGNGQGQYLSQRGPLQSSNTQSVRAWIDAPSFVAAADHYHRHHYLSPVSAAAALVYQSSPSSAFAPGGFSGFRVPARIQGEEEHDGVSDKPSSASSDSRR 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01307 416 MobiDBLite consensus disorder prediction 69 90 - -
Spst5g01307 416 MobiDBLite consensus disorder prediction 136 177 - -
Spst5g01307 416 MobiDBLite consensus disorder prediction 391 416 - -
Spst5g01307 416 MobiDBLite consensus disorder prediction 156 177 - -
Spst5g01307 416 MobiDBLite consensus disorder prediction 393 416 - -
Spst5g01307 416 ProSiteProfiles TCP domain profile. 75 133 IPR017887 -
Spst5g01307 416 MobiDBLite consensus disorder prediction 42 90 - -
Spst5g01307 416 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 46 335 IPR005333 GO:0003700
Spst5g01307 416 Pfam TCP family transcription factor 74 159 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01307 Spst-Chr5 26779772 26781472 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01307 55 415 TCP Transcription Factor Family AT1G53230 45.865 2.87e-81 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Spst5g01307 TCP 1.7e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01307 - - vum:124829805 591.267