Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00361 ATGGCCGAAATCGAAGAAATTGGGCCTGATGTCTGTTCGGATTTAGAAGTTGATGATATTAGATGCCCCAATATAGCGGAGAAAGATGTCAGTGATGAAGAGATTGAAACAGAAGAATTGGAGCGGCGGATGTGGAAGGATCGGATCAAACTCAAAAGGCTAAAGGAAAAACAGAAGCTGGCAATTCTGCAAGCTGCAGAGAAGCAAAAGCCAAGGCAGTCTAGTGATCAAGCTCGTAGGAAGAAAATGTCCAGAGCACAGGATGGGATTCTGAAGTATATGCTAAAGCTTATGGAAGTCTGCAAAGCTCGTGGATTTGTGTATGGGATCATTCCTGAGAAGGGAAAGCCAGTTAGTGGTTCCTCTGACAACATTAGAGCTTGGTGGAAGGAGAAGGTAAAGTTTGATAAGAATGGCCCTGCAGCTATAGCCAAGTATGAAGCTGAGTGTCTTGCTATGAGTGAGGCAGATAATAGCCGAAATGGTAACTCGCAGAGCATTCTCCAAGACCTGCAAGATGCAACTCTTGGATCACTCTTATCTTCTTTGATGCAGCATTGTGATCCACCTCAGAGGAAGTATCCATTGGAAAAGGGCATACCCCCACCTTGGTGGCCAACTGGTAATGAAGATTGGTGGTCACAGTTGAATTTACCTCATGGTCAGAGTCCACCTTATAAGAAGCCGCATGATTTGAAGAAGATGTGGAAAGTGGGAGTGCTTACTGCTGTTATAAAGCACATGTCGCCTAATATCGCCAAGATAAGGAGGCATGTCCGCCAGTCAAAATGCTTGCAGGACAAGATGACAGCAAAGGAAAGTGCAATTTGGTTGGGGGTATTAAGTCGAGAAGAAGCTCTCATTAGGCAGCCTAGTAGTGACAACGGTACATCTGGAATAACTGGAATGCTACCTGGTGTCCCTGCTGAGAATAAGCAAGCAGCTACTAGTAGTGCCAGCAACTATGATGTTGATGGTACTGATGATGGCATTGGTTCTGTTTCTTCTAAAGAAGATAGGAGAATTCAGAATATGGATACTGAACCATCAGATAACTTGCACAGGGTTAGGAAATCTTTCCAAGGTACAGATCAATCTAAGAGGCAACCCAGGCCAAAAAAACCCCGTCTGAATTCAAGGGCTGTCGACAAACCACCAGCACAATCTGACAATGAAATTTTACATAGTGAGCCAAGAAGCAAAGGACTCAATATTAACCAGACACAACCACAAGTAGATCGAGTCCAGATTCATGGAAATGAACAATCCAATGAGACTGATTCTGCCGCAAGGCCACTGGAAAAGGGACTTGAGGTGCCTGCGCAACTACCAGCACCTGATTTTGATCATTACTCTTATTTACATACAAACAACTTAATTTCCTCAGGATCAATGTATACGAGTGGGAGGCCAATAGACTATCCTGAGTTGCAAAACCCTGACATGCATCATGAAACCACTTACAATCTTTATAATCCAGCAGCAGGATATGAACCTGGTCAGGATGGGCCACAGCTACATTCTCGGAACAACAATGAAGCAAGGCCAGATATTGATGCAGTACATATGAAAGGGGATGACATTACTGGAGATTTGCAATATATTGATCACTCTTTCTTTGGATCACCGCTTAGTAGCATGTCATTAGAATTTGGAGGACTTAACAGTCCGTTCCATTTAGATGATTTCTTGGGTGATGATGAAATGATACAGTACTTTGGAGCATAA 1728 0.434 MAEIEEIGPDVCSDLEVDDIRCPNIAEKDVSDEEIETEELERRMWKDRIKLKRLKEKQKLAILQAAEKQKPRQSSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAIAKYEAECLAMSEADNSRNGNSQSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGIPPPWWPTGNEDWWSQLNLPHGQSPPYKKPHDLKKMWKVGVLTAVIKHMSPNIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREEALIRQPSSDNGTSGITGMLPGVPAENKQAATSSASNYDVDGTDDGIGSVSSKEDRRIQNMDTEPSDNLHRVRKSFQGTDQSKRQPRPKKPRLNSRAVDKPPAQSDNEILHSEPRSKGLNINQTQPQVDRVQIHGNEQSNETDSAARPLEKGLEVPAQLPAPDFDHYSYLHTNNLISSGSMYTSGRPIDYPELQNPDMHHETTYNLYNPAAGYEPGQDGPQLHSRNNNEARPDIDAVHMKGDDITGDLQYIDHSFFGSPLSSMSLEFGGLNSPFHLDDFLGDDEMIQYFGA 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00361 575 FunFam Ethylene insensitive 3-like 1 72 150 - -
Spst5g00361 575 Coils Coil 37 57 - -
Spst5g00361 575 MobiDBLite consensus disorder prediction 289 407 - -
Spst5g00361 575 FunFam Ethylene insensitive 3-like 1 159 295 - -
Spst5g00361 575 Pfam Ethylene insensitive 3 38 285 IPR047091 GO:0003700
Spst5g00361 575 SUPERFAMILY DNA-binding domain of EIN3-like 166 289 IPR023278 GO:0003700|GO:0005634
Spst5g00361 575 Gene3D - 157 296 IPR023278 GO:0003700|GO:0005634
Spst5g00361 575 Gene3D - 72 148 IPR023278 GO:0003700|GO:0005634
Spst5g00361 575 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 14 561 IPR006957 GO:0003700|GO:0005634
Spst5g00361 575 MobiDBLite consensus disorder prediction 64 83 - -
Spst5g00361 575 MobiDBLite consensus disorder prediction 332 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00361 Spst-Chr5 2993863 2996217 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00361 16 558 EIL Transcription Factor Family AT1G73730 53.641 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Spst5g00361 EIN3 1.3e-126 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00361 5 2993863 2996217 Spst5g00361 5 2993863 2996217 ECH