Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00167 ATGAAAGAAAGAAAAGAAGAAAAGGCTACACTGGAGTTGGGGAGCACGTTGAATACGAAAAAGAGGATGATCCGCTTATTATTAACAACATTTTTGTGCGCTCTTGCATCCAAATCAACAGCGATTTTCCAATGCAGGGAACAAACCAGGTGCGGAGCGTTGGTCGGTTACAAATCGCGGGATCCGACCACTTTAGGGGCCATCCAGAGACTGTTCAACGTGAGTCGAGCGGCGGACATTCTCGCCGCTAACGGCCTTCCCGAGTGGACCATACCCGACAATTTCACGGTGGATCAGAAACGCGTCACGCGTATCCCGTTTGAGTGCGACTGCACGGAACCTGAGTCGTACGGTAAGGCCACTAACCCTCCCGTCTACAAGGTGCGGATGGGTGAGAATATTAGTGACATAACAACGACAGTGTTCTCGGGATTGGTTAATTCATTGGATATTCAATATGGAAATAACATCAGCAACTTGGACAGTTTATTCGTGGGACAGGAACTGCGTATTCCACTGCCCTGCAGCTGCGGGAAGGTGAATGGGGTGGGTGTGGTGCACTTTGGATTGACGCTGGAATACGGACTCACCTTGGAACAGATAGGTGAGGAGTACCACATCGACTCAGAGACCCTCTGGAGTTTGAATCCAGCTTCCAATCCCAATTTTCTGCTCGGAACGGCTGTGGATATTCCTCTCCCAGGTTCCTCTTTCTTTTTCACAGTGCAATGCCTTCTTTCAAGAATTTAA 750 0.4893 MKERKEEKATLELGSTLNTKKRMIRLLLTTFLCALASKSTAIFQCREQTRCGALVGYKSRDPTTLGAIQRLFNVSRAADILAANGLPEWTIPDNFTVDQKRVTRIPFECDCTEPESYGKATNPPVYKVRMGENISDITTTVFSGLVNSLDIQYGNNISNLDSLFVGQELRIPLPCSCGKVNGVGVVHFGLTLEYGLTLEQIGEEYHIDSETLWSLNPASNPNFLLGTAVDIPLPGSSFFFTVQCLLSRI 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00167 249 Pfam LysM domain 126 172 IPR018392 -
Spst5g00167 249 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 33 233 - -
Spst5g00167 249 Gene3D LysM domain 120 180 IPR036779 -
Spst5g00167 249 ProSiteProfiles LysM domain profile. 124 171 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00167 Spst-Chr5 1566460 1570361 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00167 26 237 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 34.579 2.33e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00167 - - gmx:100811504 251.906