Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00041 ATGGAAGTACTAGGGAGCGAGGATTTGGAGGAAACAAACTACTCACTCCTCGATTCTCTTCAGCTTTTCGCATTGGCTATGCTTCTCGATCAAATACAATTTCGACACGAAAGTGATGGGTGGAGTAGGGAGGAGTTTCAAGAGCTTCAGAACATTAATACTACTGCTAATATCTCAAAACAAGGGACTCAAAATACTGCAGCAGTTCAAGCTGGGGTAGAAAAGAATCTCAATATTACACAGCCAGTTGTAGGTCCAAAGAATAATGTATTTGAAGATGAGAAGAATGATCCATCCCTATCTACTACCATTGCTAATGACAAACTCCTTGATGGACTTTTAGTTTCCTCATTTGATGAAGCATCATGCACAAGCAGGTATCAATCTTATTTGTATCGCAAAGCTTCTCCTCACAAACCTTCTAAATATCTGATATCCAAGCTACGAAACTATGAACGTCTTCATCAAAGTTGTGGACCTTATACCAAATCCTACAACGAAACCATGAGAAAGGGTGCAAAATTGAGCAAAAATGATGTTGGTAAAGAGTGCAAATATCTTGTCTGGACAGCTACCGATGGGTTAGGGAACAGGATGATAACCTTGGTTGCAGCATTTCTTTATGCTATCCTCACAGACCGTGTTCTACTTGTTAGATTTGACGTTGATATGTTTGATCTCTTTTGTGAGCCATTTCCTGACTCCTCATGGTTGTTGCCCAAGAATTCTCCTTATTGGAAAGATCTGCAACAATTTGAAACACGTGAAAGCTTGTTTATGAATAACAAGGAAAACAGATCACATGAGCTTTTGCCACCAGTTATTTTTCTTAATTTAATGCATACCCATGTTGGTCATACTGATCTTTTTCATTGTGATCAAAGTCAGGATCTTCTCCACAAAATCCCCGTGCTGATTATATGGTCGAATCAATATTTTGTCCCTTCTCTTTTTATGATATCCTCGTTTGAACAAGAGCTGAGCAAAATGTTCCCTAACAAAGACACTATATTTTATCATCTGGGACGTTACCTTTTTCACCCATCAAATGAGGCATGGGAACTAATTCGGAATTTCTACGAGGCACACCTAACTAAGGCAGATGAGAGGATTGGCCTGCAGATTAGAGTATTTAATACCCAACAAACACCACATCAAATCATTCTCAATGAAATTGTAGCTTGCGCGCATCAAAATAAGTTGTTGCCAGAATTCGAGCTGCAAAACTCAGCGACTTTTCCTTTAGAAAAGCAGACCTCAAAAGCTGTTCTAGTAGTATCTTTATACTCAAAATATGGAGAGAAGTTGAAGACTATGTATCAGACAAATACAAGTTCGAGCAGGCAAGTAATAAAAGTTTATCAGCCAAGTCATGAGGAGCGTCAAAATTCAAGTGATAGCATGCACAACATTAAGGCATGGACTGAAATATATTTACTGAGTTTGTGTGATGCATTGGTTACAAGCCCCATGTCCACTTTTGGGTATGTTGCTCACAGTCTTGGAGGTTTGAAACCATGGATTTTGCAGACTTTATATGGGAAAACCGTCCCAGATCCACCTTGTCAACGAGCCAAGTACATGGAACCTTGTTTCCATTTTCCTCCCAAGTATGATTGTAGGGCCAATAGCACAGTCGATTTTACTTCCCTTTTCAATCATATTGAGCATTGTGAAGATGTGTCTGGTGGACTGAAGGTGGTTAATACCTATGACTAG 1719 0.3933 MEVLGSEDLEETNYSLLDSLQLFALAMLLDQIQFRHESDGWSREEFQELQNINTTANISKQGTQNTAAVQAGVEKNLNITQPVVGPKNNVFEDEKNDPSLSTTIANDKLLDGLLVSSFDEASCTSRYQSYLYRKASPHKPSKYLISKLRNYERLHQSCGPYTKSYNETMRKGAKLSKNDVGKECKYLVWTATDGLGNRMITLVAAFLYAILTDRVLLVRFDVDMFDLFCEPFPDSSWLLPKNSPYWKDLQQFETRESLFMNNKENRSHELLPPVIFLNLMHTHVGHTDLFHCDQSQDLLHKIPVLIIWSNQYFVPSLFMISSFEQELSKMFPNKDTIFYHLGRYLFHPSNEAWELIRNFYEAHLTKADERIGLQIRVFNTQQTPHQIILNEIVACAHQNKLLPEFELQNSATFPLEKQTSKAVLVVSLYSKYGEKLKTMYQTNTSSSRQVIKVYQPSHEERQNSSDSMHNIKAWTEIYLLSLCDALVTSPMSTFGYVAHSLGGLKPWILQTLYGKTVPDPPCQRAKYMEPCFHFPPKYDCRANSTVDFTSLFNHIEHCEDVSGGLKVVNTYD 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00041 572 Gene3D - 353 507 - -
Spst5g00041 572 Pfam Xyloglucan fucosyltransferase 96 541 IPR004938 GO:0008107|GO:0016020|GO:0042546
Spst5g00041 572 PANTHER FUCOSYLTRANSFERASE 2-RELATED 90 569 IPR004938 GO:0008107|GO:0016020|GO:0042546
Spst5g00041 572 FunFam Galactoside 2-alpha-L-fucosyltransferase 182 233 - -
Spst5g00041 572 Gene3D - 182 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00041 Spst-Chr5 564107 567789 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00041 102 568 Xyloglucan Fucosyltransferase1 AT2G03220 50.213 1.08e-163 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00041 K13681 - gmx:100814715 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00041 5 564107 567789 Spst4g02494 4 65118612 65121303 PCT