Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00040 ATGGATAAAGTAGGATGGAGTTTCAAGAGTTTCAGAACATTATTGGTTGTGGCTTCTGTAACCTTCCCTATTTTAGTCACATTTACTCTCATACACCAAATCTCAGTTTTTGATCTCGTCCAAGCTTTTAACGCTTTGGCTGCAAAAGCACACAATGCTACTAATATTGCCTTAAAACAAGGAACTCAAAATGCTACCACTACTAATTTCTTACAACAAGGAGCTCAAAATTTCTTAAGACAAGGGGTTACGCCTGGGATCTTAGAAGAACGAACTCAGACACAATCTCTCTCAGGTCCAAAGAATAATTCATTTGAAGATGGGAAGAATGTTCTGTCTCTATCTACTACCACCATTTCTAATGACAAACTCCTTGATGGGCTTCTGGTTTCCTCATTTGATGAAGCATCATGCTTTAGCAGATATCGATCTTATTTGTACCGCAAAACTTCCCCTCACAAACCTTCTAAATATCTGATATCCAAGCTACGAAACTATGAACATCTTCATAGAAATTGTGGACCTTCTACCAAATCATACAACAAAATCATGACAATGGGAACAAACTTTAGCAAAATTGATGTTAGTACAAAGTGTAAATATCTTGTCTGGACAGCTGCCAATGGCTTAGGGAACAGAATAGTAACCTTGGTTGCAGCATTTCTTTATGCTATTCTTACAGATCGTGTTCTGCTTGTTAAATTTGGGGCCGATATGTTTGGTCTCTTTTGTGAACCATTTCCTGATTCCTCATGGTTATTGCCTAGGAGTTTTCCTTATTGGAAAGATCAGAAACATATTGAAACATATGAAAGCATGTTAAAGAATACAAATGCAAACAGTTCACAGGAACTTTTGCCACCATTTCTTATTCTTAATCTACAGCACACCCACGATGGTCACAATAATTTTTTTCACTGTGATGGAAGTCAAGATCTTCTTCGGAACATTCCTGTGCTGATTTTAAGTTCGGACCAATATTTTGTCCCTTCTCTTTTTATGATTCCATCATTTAGACAAGATCTAAGTAAAATGTTCCCTGAGAAAGACACTGTTTTCCACCATCTTGGACGTTACCTTCTTCACCCATCAAATGAGGCATGGGAAATAATTAGAAAATTCTATGAGGCACACCTAGCCAAGGCAAATGAGAGGATTGGCCTGCAGATTAGAGTTTTTAATACTCATCGAGCGCCACATCAAACTGTTATTAATGAAATTATAGCCTGCGCCCTTCAGCATAAGTTGCTGCCTGATCTCAACACACAAAAGTCAGTAACTTCTCCTTCGAAGAAGAAAACCTCAAAAGCTGTTTTAGTAGCATCTTTATACTCAGAATACGGTGAGAGGCTGAAGACTATGTATCAGGCAAATAGAACTGTGACCACAGAAGTAATAAGAGTCTATCAGCCCAGCCATGAAGAGCGTCAAAAGTCAAATGATGACATGCACAACATTAAGGCATGGACTGAAATATATTTGCTGAGTTTGTGTGATGCATTGGTTACAAGCCCTAAGTCTACTTTTGGGTATGTTGCTCACAGTCTTGGAGGTTTGAAACCATGGATTTTGCAGCGGGCATACGATGAAACCATCCCAGATCCACCTTGTCGACGAGCCAAGTCCATGGAGCCTTGTTTCCATTATCCTCCCAAATATGACTGTAGGGTCAATGGCACAGTTGATTTTACTTCCCTTTTTCAAGATATGAAGCATTGTGAAGATGTATCTAGTGGACTGACGCTGGTTAATGGTAATCACTAG 1764 0.3895 MDKVGWSFKSFRTLLVVASVTFPILVTFTLIHQISVFDLVQAFNALAAKAHNATNIALKQGTQNATTTNFLQQGAQNFLRQGVTPGILEERTQTQSLSGPKNNSFEDGKNVLSLSTTTISNDKLLDGLLVSSFDEASCFSRYRSYLYRKTSPHKPSKYLISKLRNYEHLHRNCGPSTKSYNKIMTMGTNFSKIDVSTKCKYLVWTAANGLGNRIVTLVAAFLYAILTDRVLLVKFGADMFGLFCEPFPDSSWLLPRSFPYWKDQKHIETYESMLKNTNANSSQELLPPFLILNLQHTHDGHNNFFHCDGSQDLLRNIPVLILSSDQYFVPSLFMIPSFRQDLSKMFPEKDTVFHHLGRYLLHPSNEAWEIIRKFYEAHLAKANERIGLQIRVFNTHRAPHQTVINEIIACALQHKLLPDLNTQKSVTSPSKKKTSKAVLVASLYSEYGERLKTMYQANRTVTTEVIRVYQPSHEERQKSNDDMHNIKAWTEIYLLSLCDALVTSPKSTFGYVAHSLGGLKPWILQRAYDETIPDPPCRRAKSMEPCFHYPPKYDCRVNGTVDFTSLFQDMKHCEDVSSGLTLVNGNH 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00040 587 PANTHER FUCOSYLTRANSFERASE 2-RELATED 37 584 IPR004938 GO:0008107|GO:0016020|GO:0042546
Spst5g00040 587 FunFam Galactoside 2-alpha-L-fucosyltransferase 369 523 - -
Spst5g00040 587 Gene3D - 368 526 - -
Spst5g00040 587 Gene3D - 196 250 - -
Spst5g00040 587 Pfam Xyloglucan fucosyltransferase 119 556 IPR004938 GO:0008107|GO:0016020|GO:0042546
Spst5g00040 587 FunFam Galactoside 2-alpha-L-fucosyltransferase 197 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00040 Spst-Chr5 560780 562959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00040 115 583 Xyloglucan Fucosyltransferase1 AT2G03220 51.266 2.55e-168 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00040 K13681 - gmx:100799776 934.095