Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02832 ATGGAGGAAATAGATAAAATACCAAAGTCTCTGATGGAAAATCTGCTTGGCCTTTTGAGGGTTCGCGTGAAGCGCGGTGTCAACCTTGCCGTTCGTGATGTCCGAAGCAGCGATCCTTATGTTGTCATCAGGATGTTTAATCAGAAACTAAAGACTCGCGTCATTAAAAAGGATGTGAATCCTGAATGGAATGAAGACCTTACGCTTTCTATTATAGATCCGAATCACCAAGTTAAACTGACAGTGTATGACCGTGACACCTTTAGCAAAGATGACAAAATGGGAGATGCAGAATTTGATATCTTTCCCTTTATAGAAGCCTTGAAGAGCGACTTAACTGGCCTTCCAAATGGTACTGTACTCACAAGAATACAACCAAGCGCGCAGAACTTCCTGGCCGATGAGAGCTGCATCACTTATGTCAATGGCAAGATTGTCCAAGATATGATCCTTAGATTGCAAAATGTGGAATGTGGGGAAGTGGAAATTCAATTGCAGTGGATTGATCTTCCTGGCTCTAAGGGTGTATTAACAACTTCATGA 543 0.4217 MEEIDKIPKSLMENLLGLLRVRVKRGVNLAVRDVRSSDPYVVIRMFNQKLKTRVIKKDVNPEWNEDLTLSIIDPNHQVKLTVYDRDTFSKDDKMGDAEFDIFPFIEALKSDLTGLPNGTVLTRIQPSAQNFLADESCITYVNGKIVQDMILRLQNVECGEVEIQLQWIDLPGSKGVLTTS 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02832 180 ProSiteProfiles C2 domain profile. 1 114 IPR000008 -
Spst4g02832 180 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 102 IPR035892 -
Spst4g02832 180 Gene3D C2 domain 13 175 IPR035892 -
Spst4g02832 180 CDD C2_ArfGAP 16 159 - -
Spst4g02832 180 Pfam C2 domain 17 101 IPR000008 -
Spst4g02832 180 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 14 174 IPR044562 -
Spst4g02832 180 SMART C2_3c 18 113 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02832 Spst-Chr4 67990310 67992324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02832 49 176 C2H2 Transcription Factor Family AT1G70790 60.769 3.75e-52 162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02262 1 31260998 31262761 Spst4g02832 4 67990310 67992324 ECH
Spst3g02276 3 65789194 65790539 Spst4g02832 4 67990310 67992324 ECH
Spst2g01956 2 18611799 18612991 Spst4g02832 4 67990310 67992324 ECH
Spst4g02832 4 67990310 67992324 Spst4g02832 4 67990310 67992324 ECH
Spst3g00658 3 10034620 10035302 Spst4g02832 4 67990310 67992324 PCT