Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02795 ATGGATCCTCCACCTCTTTCTGCCGCCACCATGGTTACTACCACCACTCATAAAAATCATCCAGATTCCATAGAGTCTTCGTCTCCACGTTCCCGTAACGCAGAAATATGGAATGATGAGACTTTACCGGTTGTTCCTGGCGCCAAGCTGCGTCTCATGTGCAGCTATGGTGGCCACATCATGCCTCGCCCTCATGACAAGACACTCTGCTATGTCGGCGGTGACACGAGGATTGTGGTGGTGGACCGCCACTCTTCGTTGAAAGACCTGTGTGCTCGGCTTTCCCGAACCATTCTCCATGGAAGACCCTTCACGCTCAAGTACCAGCTTCCCCATGAAGACCTTGATAGCCTCATCACTGTCACCACTGATGAAGATCTTGACAACATGGTGGAAGAGTATGACCGAATTATGGCCAAAGGTTCAGCTTCTTCACGGCTCAGGGTGTTCTTGTTCTTCACAAAACCTGAGGCCACTGTTTCTATGGGGTCACTACTTGATGATGTGAAGTCAGAGACATGGTTTGTTGATGCACTCAACAACTCTGGGATGTTAAACAGGGTAGTTTCAGATACTGCTGGGGATTCCTTTGTGAACCTTGATGGTGTTGGTGGTGGTGTCAGTGCTAGTGGTTCAAGCAACAACTTGGAGGCTTTGCCCGATACTAACAATAACAAGGCTAAGAACTTGCCTGATGTGGTGCAATCAAGTCCTGGTTCACCCATGATGGAGAACAGTTCTTCTTCTTCTCCTTCTTTCTCTCCTTCTCTGGCAAATCTGCCTCCGATTCGGGTTCGTGTTGATGACCATGTTAGTAGGCTTCAACAAGAGAACAAGGTTGGGGGCGTGGTGGAGGAGCAGTTTGCTCAGATGACAGTTGCAAGTGGGGTGAAGTCAGATGAAGGGTTGGTGAATGTGATTTCTTCTGCAGTGGCTGCACCATTAATTTCCCCTGCTGTGACTATGCCATCTGCTGGGGTGGTTACTACTAGTGATAACGTGATGAATAGAGTTGTTTCCGAGGATGAGAGATCAGATCCTGGGTTTCGGAAGCCCCCTTTACCATTGCAGCTTGTGCAGCCAAGGACTAGTGGTGGTTTTAGTTTGCCTTCTCCTGATTCAGTTGCAAGTGATAGTAGTATTGCATCTGCAAATTCTTTCTCCAAGACTGTTTACTATCAAGATCAAGTCCAAGCTGCACTACTAGACAATAAAGCAGTTGCTTTCCAAAATGGCAAGAGTGAAATATCTGATCAGGTGATTCAGGTTCATGGACAAGTTCAGGATTCTGGCTACACATTACCCCCACAATTGGATCAAAATAGGCAACTCCAGCAGCAGAAGCCCTTGGTCCATCCCAGCACTCACTACATCCACCACCCTGCAGCCACAGGTCCAGTGCCAGTTGCATCATACTATCCAGTTTATGCCACACCGCCACAACAACTTCACCCTCCAATTGGTCAGCAACAGTACCCATTTTATGTGATGCCTGTTGGACCCACACAAGTAACACAACCATACAACATGGCCTTGCAGCCCAATATGACTGACCCAAATGTTTTAGCCTCAGGCAGAACCCTAATACCACAAACTGCTGTTACCTCAGCAGCATACAAGGATGGTACTCCACCCATCTACCCCACCAAGTCAATTAGCCCTACTATACCTGAGCTGACTCCAAGTGTTTACAAGGCTCCTCCTGTGACATCAACTCCTGCTTATGCTCCAATACCTCCCAACCAGTTTCAGCCACAGTATGTGGGTTTGCCTCAGTTCCATCATTCACCACAGTCCATTGCTGTGGCTCCCTCTAGTACTACTACTAATTATACTTATGAATATGGTGGCCATGTGCAAGACCAACCATACTACACCCAACAACAAACCACTACTGCTCCAATGCTACCCCAGTACCAATCCATGACCCCAGCTGCAGCTGCTGCAGCACTATCAGATGCTTCAAAACAGTTTCCTGCAGACAACATTCAGCAGCAAAATAGAGCATCACAGCCAGTATGA 2022 0.4782 MDPPPLSAATMVTTTTHKNHPDSIESSSPRSRNAEIWNDETLPVVPGAKLRLMCSYGGHIMPRPHDKTLCYVGGDTRIVVVDRHSSLKDLCARLSRTILHGRPFTLKYQLPHEDLDSLITVTTDEDLDNMVEEYDRIMAKGSASSRLRVFLFFTKPEATVSMGSLLDDVKSETWFVDALNNSGMLNRVVSDTAGDSFVNLDGVGGGVSASGSSNNLEALPDTNNNKAKNLPDVVQSSPGSPMMENSSSSSPSFSPSLANLPPIRVRVDDHVSRLQQENKVGGVVEEQFAQMTVASGVKSDEGLVNVISSAVAAPLISPAVTMPSAGVVTTSDNVMNRVVSEDERSDPGFRKPPLPLQLVQPRTSGGFSLPSPDSVASDSSIASANSFSKTVYYQDQVQAALLDNKAVAFQNGKSEISDQVIQVHGQVQDSGYTLPPQLDQNRQLQQQKPLVHPSTHYIHHPAATGPVPVASYYPVYATPPQQLHPPIGQQQYPFYVMPVGPTQVTQPYNMALQPNMTDPNVLASGRTLIPQTAVTSAAYKDGTPPIYPTKSISPTIPELTPSVYKAPPVTSTPAYAPIPPNQFQPQYVGLPQFHHSPQSIAVAPSSTTTNYTYEYGGHVQDQPYYTQQQTTTAPMLPQYQSMTPAAAAAALSDASKQFPADNIQQQNRASQPV 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02795 673 SUPERFAMILY CAD & PB1 domains 65 162 - -
Spst4g02795 673 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 69 154 - -
Spst4g02795 673 PANTHER OS05G0427100 PROTEIN-RELATED 21 507 - -
Spst4g02795 673 MobiDBLite consensus disorder prediction 8 33 - -
Spst4g02795 673 SMART PB1_new 64 154 IPR000270 GO:0005515
Spst4g02795 673 MobiDBLite consensus disorder prediction 647 673 - -
Spst4g02795 673 ProSiteProfiles PB1 domain profile. 49 152 IPR000270 GO:0005515
Spst4g02795 673 Pfam PB1 domain 66 152 IPR000270 GO:0005515
Spst4g02795 673 MobiDBLite consensus disorder prediction 1 33 - -
Spst4g02795 673 CDD PB1_UP2 53 152 - -
Spst4g02795 673 MobiDBLite consensus disorder prediction 657 673 - -
Spst4g02795 673 Gene3D - 67 153 - -
Spst4g02795 673 MobiDBLite consensus disorder prediction 211 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02795 Spst-Chr4 67656562 67658752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02795 48 229 MAP Kinase Kinase Kinase AT1G16270 38.462 8.31e-27 115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01394 10 14434131 14436441 Spst4g02795 4 67656562 67658752 ECH
Spst4g02795 4 67656562 67658752 Spst4g02795 4 67656562 67658752 ECH