Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g02676 ATGTCAACAGCTCCAGCGCCGTCTTCGCCTCCGCCATCCTCTCCGGCCACTCCTTCCGCACCACCGCCCTCCACACCTTCCGCGCCGCCTCCCGCCACTCCGTCGTCACCTCCACCATCACCTCCCTCGTCGCCGCCACCATCACCTCCCTCGTCGTCGCCGCCGCCGGCTACCCCCTCTGCGCCTCCGCCTGCGACACCTTCCTTGCCAACTCCGTCGACTCCCTCTGCTCCTCCGCCGTCTACTCCTTCGTCTCCAACACCGCCGTCGAGTCCTCCTCCGTCGCCTCCGTCTGGTTCTCCTCCGTCGCCTCCGTCTGGTTCTCCTCCGTCGCCTCCGTCTGGTTCTCCTCCGTCGCCTCCGTCTGGTTCTACACCGTCGCCACCGAGTGGCGGCGGAGGCGGCAACACTCCGAGTCCGCCGTCTCGGAGCTCGCCTGCTCCTCCGTCCGAATCGAACCGGACCTCGCCTCCGTCTCCATCGCCGTCTTCATCCGGTATTTCGACCGGCGTGGTGGTCGGAATCGCCGTCGGGGCGGTCGCCGTTCTTGTTGTGTTAAGCATTCTCTGCATATGCTGTCGGAAGAAGAAGCGAAGACGTGACGAGGAGTACTATGCTCCGCCGCCGCCGCCGCGCGGACCCAAAGATGATACATATGGTGGTCCCCCACGTCAATGGCAACACAATGTTCCCCCTCCTCAAGATCATGTGGTTTCAATGATGCCTCCAAAGCCTTCGCCTCCACCCGCTCCACACGTTGCTCAACCTCCTCCTCCTCCTCCTCCTTTCATCATCAGCAGTGGTGGGTCTGGATCAAACTATTCAGGTGGTGAACCACTTCCTCCTCCTTCTCCAGGAATTGCATTGGGGTTCTCTAAGAGCACGTTTAGCTATGAGGAGTTGGCACGCGCAACGGATGGATTCTCTGATGCGAACCTCCTTGGGCAAGGTGGATTTGGATATGTTCACAGAGGAATTCTTCCCAATGGCAAGGAGGTGGCAGTGAAGCAATTGAAGGCTGGAAGTGGGCAAGGAGAGCGTGAGTTCCAGGCTGAAGTTGAGATAATTAGCCGTGTCCATCACAAGCATCTTGTATCTTTGGTTGGATACTGCATCACTGGGTCCCAGAGGTTGCTTGTTTATGAATTTGTTTCGAACAACACATTGGAGTTCCATTTGCATGGACGAGGACGACCTACCATGGATTGGCCCACAAGACTAAGAATTGCTTTAGGATCTGCTAAGGGACTGGCGTATCTGCATGAAGATTGTCATCCTAAGATCATCCATCGTGATATCAAAGCTGCCAATATCCTTCTGGATTTTAAGTTTGAAGCAAAGGTTGCTGATTTCGGTCTTGCTAAGTTTTCTTCTGATGTCAATACTCATGTTTCTACACGAGTGATGGGGACTTTTGGGTATCTGGCTCCAGAATATGCTTCTAGTGGAAAACTCACAGACAAATCAGATGTTTTCTCCTATGGAGTCATGCTTCTTGAGTTAATAACTGGACGACGGCCAGTTGATAAAACTCAAACATTCATGGAGGATAGTTTGGTAGACTGGGCTAGACCTTTGCTCACACGAGCTTTGGAAGAGGATGATTTTGAATCTATAATTGACCCAAGGCTCCAAAATGACTATGACCCTAATGAGATGGCACGAATGGTGGCATGTGCTGCAGCTTGCACACGTCATTCGGCAAAGCGCCGACCAAGGATGAGCCAGGTTGTGCGTGCTCTGGAAGGAGATGTGTCTCTAGCAGATCTTAACGAAGGAATCAAACCTGGACATAGCAGTATGTACAGTTCTCATGAAAGCTCAGATTATGATACTGCACAGTACAGAGAAGACATGAAAAAGTTCAGAAAAGTGGCATTGGGAACTCAGGAGTATGGTGCAAGCAGTGAGTACAGTGCAGCTACAAGTGAGTATGGTTTAAACCCATCTGGCTCAAGCAGTGAAGCACAAAGCCGCCAAACCACAAGGGAAATGGAAATGAGAAAGATGAAGAACAGTCAAGGTTTCAGTGGAAGCTCTTGA 2043 0.5277 MSTAPAPSSPPPSSPATPSAPPPSTPSAPPPATPSSPPPSPPSSPPPSPPSSSPPPATPSAPPPATPSLPTPSTPSAPPPSTPSSPTPPSSPPPSPPSGSPPSPPSGSPPSPPSGSPPSPPSGSTPSPPSGGGGGNTPSPPSRSSPAPPSESNRTSPPSPSPSSSGISTGVVVGIAVGAVAVLVVLSILCICCRKKKRRRDEEYYAPPPPPRGPKDDTYGGPPRQWQHNVPPPQDHVVSMMPPKPSPPPAPHVAQPPPPPPPFIISSGGSGSNYSGGEPLPPPSPGIALGFSKSTFSYEELARATDGFSDANLLGQGGFGYVHRGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCITGSQRLLVYEFVSNNTLEFHLHGRGRPTMDWPTRLRIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKFSSDVNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSYGVMLLELITGRRPVDKTQTFMEDSLVDWARPLLTRALEEDDFESIIDPRLQNDYDPNEMARMVACAAACTRHSAKRRPRMSQVVRALEGDVSLADLNEGIKPGHSSMYSSHESSDYDTAQYREDMKKFRKVALGTQEYGASSEYSAATSEYGLNPSGSSSEAQSRQTTREMEMRKMKNSQGFSGSS 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g02676 680 Pfam Protein tyrosine and serine/threonine kinase 313 581 IPR001245 GO:0004672|GO:0006468
Spst4g02676 680 FunFam proline-rich receptor-like protein kinase PERK1 286 383 - -
Spst4g02676 680 ProSiteProfiles Protein kinase domain profile. 308 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02676 680 Gene3D Transferase(Phosphotransferase) domain 1 384 592 - -
Spst4g02676 680 Gene3D Phosphorylase Kinase; domain 1 290 383 - -
Spst4g02676 680 MobiDBLite consensus disorder prediction 141 156 - -
Spst4g02676 680 ProSitePatterns Protein kinases ATP-binding region signature. 314 336 IPR017441 GO:0005524
Spst4g02676 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Spst4g02676 680 MobiDBLite consensus disorder prediction 236 265 - -
Spst4g02676 680 SUPERFAMILY Protein kinase-like (PK-like) 285 581 IPR011009 -
Spst4g02676 680 FunFam Proline-rich receptor-like protein kinase PERK1 384 592 - -
Spst4g02676 680 MobiDBLite consensus disorder prediction 1 127 - -
Spst4g02676 680 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 178 641 IPR047117 -
Spst4g02676 680 SMART serkin_6 308 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g02676 680 MobiDBLite consensus disorder prediction 199 283 - -
Spst4g02676 680 PRINTS Proline rich extensin signature 10 31 - -
Spst4g02676 680 PRINTS Proline rich extensin signature 34 50 - -
Spst4g02676 680 PRINTS Proline rich extensin signature 51 68 - -
Spst4g02676 680 MobiDBLite consensus disorder prediction 631 680 - -
Spst4g02676 680 MobiDBLite consensus disorder prediction 632 660 - -
Spst4g02676 680 MobiDBLite consensus disorder prediction 1 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g02676 Spst-Chr4 66668555 66672351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g02676 128 663 Trihelix Transcription Factor Family AT1G70460 49.723 5.05e-173 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Spst4g02676 PK_Tyr_Ser-Thr 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g02676 - - gmx:100781944 849.351