Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01955 ATGATGAACGGTGACTCTCGCGTTTCTCTTGAGACACAGTACATAAGGAGGCATCACAGGCATGAGCCAAGGGAAAATCAGTGCACTTCTGCTCTCGTTAAACATATCAAAGCCCCTGTTCACCTTGTGTGGTCGCTGGTTAGAAGATTTGATCAACCTCAAAAGTACAAGCCATTTGTGAGCAGATGTGTCATGCAAGGGGACCTTGGAATTGGAAGTGTCAGAGAAGTGAATGTTAAATCTGGCCTTCCAGCCACAACAAGTACTGAGAGGTTGGAACAACTTGATGATGAGGAGCACATTCTTGGCATCAGAATTGTTGGAGGTGACCATAGGCTGAGGAACTACTCTTCCATAATCACCGTCCACCCTGAGGTCATTGAGGGGAGACCTGGAACAATGGTGATTGAATCATTTGTGGTAGATGTGCCTGATGGGAACACCAAGGATGAAACTTGTTACTTTGTGGAAGCTTTGATCAGGTGTAACCTAAGCTCTTTGGCTGATGTCTCAGAGAGGATGGCAGTGCAAGGTCGAACTGATCCCATCAACCATTAA 558 0.4606 MMNGDSRVSLETQYIRRHHRHEPRENQCTSALVKHIKAPVHLVWSLVRRFDQPQKYKPFVSRCVMQGDLGIGSVREVNVKSGLPATTSTERLEQLDDEEHILGIRIVGGDHRLRNYSSIITVHPEVIEGRPGTMVIESFVVDVPDGNTKDETCYFVEALIRCNLSSLADVSERMAVQGRTDPINH 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01955 185 FunFam Abscisic acid receptor PYL9 2 181 - -
Spst4g01955 185 CDD PYR_PYL_RCAR_like 28 172 - -
Spst4g01955 185 PANTHER - 25 169 - -
Spst4g01955 185 Pfam Polyketide cyclase / dehydrase and lipid transport 33 172 IPR019587 -
Spst4g01955 185 Gene3D - 3 181 IPR023393 -
Spst4g01955 185 SUPERFAMILY Bet v1-like 28 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01955 Spst-Chr4 60179261 60182222 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01955 4 60179261 60182222 Spst8g02327 8 34300106 34300669 ECH
Spst4g01955 4 60179261 60182222 Spst4g01955 4 60179261 60182222 ECH