Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04710 ATGAAGAAGTTCTCACTCTCACACTTCGATTTGAACACTAAATGTGCCTTCACTCTCTCTCTCATGCGTTTGATGGCTTTATTCGTCGCTTTTCTCCTCCTCTGCTCTGTTATTTTCTCACTCTCCGTTGTTCTTCGAGACCCTCCCTCGGATGCCGCCCTAAGGGAACCCTCATCCCTCATCCCTCTCTTTCAAATCACTCAGGATTTGGACAATAACACGTCTGATTCTGTTGAGTTGCTTCAAGATAAACTGTATGGTGGCCTTCTAGTTGATGGATTTGATGAAAGTTCCTGCCTCAGCAGGTACCAATCAGCCATGTATCACCTCAAAGGATTATCAGGGAAGCCTTCTTCTTACCTCATTTCTAGGTTAAGAAAATATGAAGCTCAACATAAACAATGTGGACCTTACACTGAATTCTATAACAAAACGGTGGACCAACTTAGGTCTGGTAAATTTACTGAGTCCTCGCCTTGTAAATATGTTGTATGGATTTCATTTAGTGGGTTAGGGAATAGGATATTGACCCTAGCTTCTGCATTTCTCTATGCTCTTCTCACAAACCGTGTTCTGCTGGTTGACCCTGGAGTGGATATGATTGATCTTTTCTGTGAGCCATTTCCAGATGCTTCCTGGTTTCTCCCTGCTGATTTTCCTCTTACTGCTCAATTTAATAATTTCAGTCAGAAATCTGATCAATGTTATGGGAAAATGCTGAAAAATAAATCCGTCGTAAATTCCAATGTTCCATCTTTTGTCTACCTTCACATAGCCCATGATTATGATGATCATGATAAGCTTTTCTTTTGTGACGAAGAGCAACATTTTCTCCAGGAAGTGCCTTGGTTAGTGTTGAAAACAGACAATTACTTTGTCCCATCTCTATTCTTGATGCCATCATTTGAGCAGGAACTGAATGATCTCTTCCCAAACAAGGAAACAGTCTTCCATTTCTTGGGTAGGTATCTGTTCCATCCCACTAACAGTGTGTGGGGGCTTGTTGCCAGATACTATCAAGCTTATTTAGCCAAAGTTGATGAAAGAGTGGGCATACAGATTAGAGTGTTTGACACAGAACCTGGTCCATTTCAACATGTATTGGATCAGATCTTAGCTTGTACTTTGAAGCATAAACTTTTGCCTGATGTTAAACACCAGCAGGATGCTATCAATTCATCAGGAATTCCTAAGTCAAAAGCGATATTGATGACATCCTTAAGCTCGGGTTATTTTGAAAAGGTAAGAGACATGTATTGGGAATATCCTACAGTGACAGGAGAAGTGATTGGTGTTTACCAGCCTAGTCATGAAGGATATCAGCAAACACAGAAGCAGATGCACAACCAAAAAGCTTGGGCAGAAATGTATCTCTTAAGCTTAACTGATGTGTTGATTACAAGCTCATGGTCTACTTTTGGCTATGTGGCTCAGGGGCTTGGAGGTTTAAAACCATGGATTCTGTACAAACCTGAGAATCGAACAGCCCCAGATCCTCCGTGTCGGCGTGCCATGTCAATGGAGCCATGTTTCCATGCTCCTCCCTTCTATGACTGCAAGGCCAAGAGAGGAACTGACACAGGAGAACTTGTTCCATATGTGAGGCACTGTGAGGATATGAGCTGGGGCCTTAAGCTTGTAGACAGTGATAGTTATCACTAG 1662 0.4206 MKKFSLSHFDLNTKCAFTLSLMRLMALFVAFLLLCSVIFSLSVVLRDPPSDAALREPSSLIPLFQITQDLDNNTSDSVELLQDKLYGGLLVDGFDESSCLSRYQSAMYHLKGLSGKPSSYLISRLRKYEAQHKQCGPYTEFYNKTVDQLRSGKFTESSPCKYVVWISFSGLGNRILTLASAFLYALLTNRVLLVDPGVDMIDLFCEPFPDASWFLPADFPLTAQFNNFSQKSDQCYGKMLKNKSVVNSNVPSFVYLHIAHDYDDHDKLFFCDEEQHFLQEVPWLVLKTDNYFVPSLFLMPSFEQELNDLFPNKETVFHFLGRYLFHPTNSVWGLVARYYQAYLAKVDERVGIQIRVFDTEPGPFQHVLDQILACTLKHKLLPDVKHQQDAINSSGIPKSKAILMTSLSSGYFEKVRDMYWEYPTVTGEVIGVYQPSHEGYQQTQKQMHNQKAWAEMYLLSLTDVLITSSWSTFGYVAQGLGGLKPWILYKPENRTAPDPPCRRAMSMEPCFHAPPFYDCKAKRGTDTGELVPYVRHCEDMSWGLKLVDSDSYH 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04710 553 Pfam Xyloglucan fucosyltransferase 65 520 IPR004938 GO:0008107|GO:0016020|GO:0042546
Spst3g04710 553 Gene3D - 157 210 - -
Spst3g04710 553 PANTHER FUCOSYLTRANSFERASE 2-RELATED 24 548 IPR004938 GO:0008107|GO:0016020|GO:0042546
Spst3g04710 553 FunFam Galactoside 2-alpha-L-fucosyltransferase 333 487 - -
Spst3g04710 553 FunFam Galactoside 2-alpha-L-fucosyltransferase 158 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04710 Spst-Chr3 98898992 98900760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04710 22 547 Xyloglucan Fucosyltransferase1 AT2G03220 63.188 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04710 K13681 - gmx:100803305 989.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04710 3 98898992 98900760 Spst3g04710 3 98898992 98900760 ECH