Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04474 ATGGCATGTTCTGTGGCATCCATGCTCTTCGTTACTATCTGCACACTGTCCTTATTTCTGTCAGTTGCTTCTGCAGCAGCATCTGTGGAAGGAAGGACAAGACCCTTTAAAAGAGTTTATGCCTTTGGGGACTCTTTTACCGACACTGGCAACACCAAGAACGCTGAAGGTCCAAGTGGCTTTGGCCATGTCTCAAACTCTCCCTACGGCACCACTTTCTTCAACCACTCCACCAACAGGTACTCAGATGGAAGGCTCGTCATTGACTTTGTGGCTGAAGATCTTTCTCTGCCGTACTTGCCCCCTTATCGTCACAGCAAAGGCAACGACACTTTCGGTGTTAACTTTGCTGTTGCTGGTTCTACTGCCATAAACCACTTGTTTTTTGTCAAGAACAACCTCTCTCTTGACATCACTCCTCAGTCCATCCAAACTCAGATGATATGGTTCAACAGGTACCTAGAGAGCCAGGAATGTGAAGAATCAAAATGCAAAGACTTTAATGATACTCTATTTTGGTTTGGGGAGATTGGTGTCAATGACTATGCCTACACTCTTGGATCTACTGTACCAGATGACACCATAAGGAAGCTTGCAATCAGCAGTGTCTCAAGAGCCTTACAGGCATTGCTAGATAAGGGTGCCAAGTACCTAGTTGTGCAGGGTTTACCTCTAACTGGGTGTTTGACATTGTCCATGTATCTGGCTCCTCCTGATGACAGGGATGACATTGGATGTGTGAAAAGTGTGAACAACCAAAGCTACTACCACAACCTTGTGCTGCAGAACAAATTACAGGAATTCAGGAAACAGTATCCCCAAGCTGTCATACTTTATGCTGATTACTTTAATGCCTACCGCACTGTCATGAAGAATCCAACCAAGTATGGATTCAAAGAGGTCTTCAATGTTTGTTGTGGATCAGGAGAACCACCTTACAACTTCAGTGTGTTTGGCACATGTGGCACACCTAACACCACTGCCTGCTCTAACCCTTCTCAGTACATTAATTGGGATGGTGTTCACCTCACTGAGGCCATGTACAAAGTTATCTCTAGCATGTTTCTGCAAGGAAATTTCACCCAACCACCGTTTAATTTTATGTTGGAAAAAAAAGAGAGGTTGGGGTGA 1131 0.4465 MACSVASMLFVTICTLSLFLSVASAAASVEGRTRPFKRVYAFGDSFTDTGNTKNAEGPSGFGHVSNSPYGTTFFNHSTNRYSDGRLVIDFVAEDLSLPYLPPYRHSKGNDTFGVNFAVAGSTAINHLFFVKNNLSLDITPQSIQTQMIWFNRYLESQECEESKCKDFNDTLFWFGEIGVNDYAYTLGSTVPDDTIRKLAISSVSRALQALLDKGAKYLVVQGLPLTGCLTLSMYLAPPDDRDDIGCVKSVNNQSYYHNLVLQNKLQEFRKQYPQAVILYADYFNAYRTVMKNPTKYGFKEVFNVCCGSGEPPYNFSVFGTCGTPNTTACSNPSQYINWDGVHLTEAMYKVISSMFLQGNFTQPPFNFMLEKKERLG 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04474 376 CDD SGNH_plant_lipase_like 39 359 IPR035669 -
Spst3g04474 376 Gene3D SGNH hydrolase 27 359 IPR036514 -
Spst3g04474 376 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 17 363 - -
Spst3g04474 376 SUPERFAMILY SGNH hydrolase 36 356 - -
Spst3g04474 376 Pfam GDSL-like Lipase/Acylhydrolase 39 353 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04474 Spst-Chr3 96327759 96329172 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04474 39 358 Acyl Lipid Metabolism Gene Families AT4G10950 26.586 7.66e-29 114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04474 3 96327759 96329172 Spst3g04474 3 96327759 96329172 ECH