Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g03753 ATGAGTTCTAGTGCTTACGTTTTGCCAACCGATGCATCACCCAAGTGGAACAACAAAGCAGACAACGCATGGCAACTAACGGCGGCAACCTTGGTGGGCCTTCAGACCGTTCCTGGGCTTGTCATCCTGTACGGCAGCATGGTTAAGAGAAAATGGGCTGTGAACTCGGCCTTCATGGCTCTGTATGCCTTTGCTTGCGTCCTCATTTGTTGGGTTTCGTGGGCCCATGGGATGGCGTTTGGGGCCGAGCTTCTGCCATTCGTGGGAAAGCCCAACCACGCTCTGGGTGGGAAGTTTCTGCTTGCAAAGTCGCCGGTTGGGTATTTTCCAATGGCTGACTTCGTCTTCTATCAATTTGCTTTTGCCGCAATCACTGTTGTGTTGCTTGCAGGGTCTTTGTTGGGGAGAATGAACTTCTATGCGTGGATGTTGTTTGTTCCTTTCTGGCTTACGTTTTCTTACACCGTTGGTGCATTCAGCATCTGGGACGATTATGGCTTCCTTGAGGGGAAAATAATCGATTATGCAGGTGGCTTCGTAATTCATTTGTCTTCTGGCGTCGCTGGTTTCACAGCTGCTTATTGGGTTGGTCCAAGAATTTCAGATGACAGGCAAAGCTTTCCACCAAATAACATAATTCTCGTGCTTGGAGGTGCAGGGTTTTTGTGGATGGGTTGGACAGGTTTTAACGGTGGAGCTCCGTTCAAGGTGGGAGAAATTGCATCCTTGGCGATCTTCAATACCCATCTATGTACTGCTACAAGCCTACTGGTTTGGCTTACTCTGGACATGATTGTGTATACCAAGAGCTCAGTCATAGGTGCCGTACAGGGAATGATCACTGGCCTCGTCTGCATCACACCAGGTGCAGGCTTGGTGGATTCATGGGCAGCAATATTGATGGGAGCTTTGTCTGGTTCGATTCCATGGTACACCATGATGGTGTTGCACAAAAAATCAGCATTCTTTCAGAGTGTGGATGATACACTGGGAGTCTTCCACACTCATGCTGTGGCTGGTCTTCTTGGGGGTGTTCTTTCTGGTTTGTTTGCCAAACCCAAGCTTCTAAGAACAATGTACACAGATGGCAACCAATATGGCCCTGGCTTACTCTATAGCTTTTCCGAGGGGGAATCAGTGGGTGAAGGCTTTAGGCAAATATGGTACCAGTTACTTGGAGCAGGGTTTATAATTGTTTGGAATGTGGTTGTTACTAGCCTCATTTGTATTGTTATAAGCCGCTTTGTGGATCTTAGGATGCAAGAAGAGGAGCTTGAGGTTGGTGATGACGCTGCTCATGGAGAAGAAGCGTACGCTTTGTGGGGTGATGGAGAGAGAACGTGGGTCCCTCTTCGTCTCCATATAAGTCCAACCATTCCTTCTTTATGCCGGCGAAGGTTTTCTATTCCTCTCACTACTATGAATCAAGAAGAGTAG 1437 0.4795 MSSSAYVLPTDASPKWNNKADNAWQLTAATLVGLQTVPGLVILYGSMVKRKWAVNSAFMALYAFACVLICWVSWAHGMAFGAELLPFVGKPNHALGGKFLLAKSPVGYFPMADFVFYQFAFAAITVVLLAGSLLGRMNFYAWMLFVPFWLTFSYTVGAFSIWDDYGFLEGKIIDYAGGFVIHLSSGVAGFTAAYWVGPRISDDRQSFPPNNIILVLGGAGFLWMGWTGFNGGAPFKVGEIASLAIFNTHLCTATSLLVWLTLDMIVYTKSSVIGAVQGMITGLVCITPGAGLVDSWAAILMGALSGSIPWYTMMVLHKKSAFFQSVDDTLGVFHTHAVAGLLGGVLSGLFAKPKLLRTMYTDGNQYGPGLLYSFSEGESVGEGFRQIWYQLLGAGFIIVWNVVVTSLICIVISRFVDLRMQEEELEVGDDAAHGEEAYALWGDGERTWVPLRLHISPTIPSLCRRRFSIPLTTMNQEE 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g03753 478 PANTHER AMMONIUM TRANSPORTER MEP2 9 446 IPR001905 GO:0008519|GO:0016020|GO:0072488
Spst3g03753 478 FunFam Ammonium transporter 5 441 - -
Spst3g03753 478 NCBIfam ammonium transporter 21 438 IPR001905 GO:0008519|GO:0016020|GO:0072488
Spst3g03753 478 ProSitePatterns Ammonium transporters signature. 174 199 IPR018047 GO:0008519|GO:0016020|GO:0072488
Spst3g03753 478 PRINTS Rhesus blood group protein signature 118 134 IPR002229 GO:0005886
Spst3g03753 478 PRINTS Rhesus blood group protein signature 213 231 IPR002229 GO:0005886
Spst3g03753 478 PRINTS Rhesus blood group protein signature 244 266 IPR002229 GO:0005886
Spst3g03753 478 Pfam Ammonium Transporter Family 23 438 IPR024041 GO:0008519|GO:0016020|GO:0072488
Spst3g03753 478 Gene3D Ammonium transporter AmtB like domains 4 441 IPR029020 -
Spst3g03753 478 SUPERFAMILY Ammonium transporter 16 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g03753 Spst-Chr3 87515267 87523205 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02315 3 66602701 66606761 Spst3g03753 3 87515267 87523205 PCT