Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02808 ATGGGCACCCCCGACAAGAAAAGATCTGATTTTGTTGATGTAGTTAGGTCTTGGATCCCCCGAAGGGCTGAGCCACCAAATGTGTCGAGGGACTTCTGGATGCCCGATCAGAGTTGTAGGGTATGCTATGAGTGTGATTCACAGTTCACAATATTCAACCGCAGGCATCATTGTCGACTATGTGGGCGAGTTTTCTGTGCCAAATGCACTGCCAATTCTGTTCCTGCGCCATCATATGAGCCAAATACCGTCCGAGAAGATTGGGAGAGGATAAGGGTCTGTAACTATTGTTTTAAACAATGGGAACGGTTAGCAGCAGTTGATAATAATGGCAGTGCAGACCCTTCGTCCACTCCTTGTCTCAGCCCTTCACCATCTACAACAAGCTTGGTCAGCACTAAGTCCAGTTGCACCTGTCATAGTAGCAGCAGCACTGCTGGTTCAGTTCCTTATACAACTGGGCCTTATCAGCGTGTGCCTTATAGTCCCCCTCAATCATCGCAAATGAATCAGATAGCTGATGAGCAAGATAATTTAAATTCTGGGAGGAGTTCAAATCCCTCTGAGGCTGTAGGGAATTTGACTTCTAACCAATTTGGCTATTGCTTCAACAGGAGTGATGATGAGGATGATGATTATGGTGTTTATCATTCTGACACAGAATCAAGACATTATTCTCATGCCCATGACTATGAAGATCCAGTTAACATTCATGGGGTTGACCATGTCTATGGGCCACATCAAATGCATACTGATGAAGATAACATTCAAGAAAAAAGCTTGAATTGCTTAACACCACCACGGAATCTTGATCTAGAAGGTGTAGGTGGAATTCAAGCACCTGATAAAGAAGCTGATGAGCATGATCATGCTGATGGATGTGAAACTTCTCCTTATCATGAGGAGAACGATGCAGAGCCTGTGGATTTTGAGAGTAATGGACTAATGTGGCTACCTCCTGAGCCAGAAGATGAAGAGGATGATAGAGAAGCTGTTCTTTTTGATGATGACGAGGATGAAGGTACTACTGGAGGTGGGGAATGGGGATATCTACGATCCTCCACTAGTTTTGGCTCTGGAGAATGTCGTAGCAGAGATAAAGCAAGTGAGGATCATAGGAAGGCCATGAAGACTGTAGTGGAAGGGCATTTTAGAGCACTGGTCACTCAGCTCTTACAAGTGGAGAACCTAAGTATTTGTGATGAAGATGGAAAAGAGAACTGGTTGGATATAATTACTGCTTTGTCTTGGGAAGCTGCTACAATTCTGAAGCCCGATATGAGCAGAGGTGGAGGTATGGATCCTGGTGGATATGTAAAGGTTAAATGCATAGCTTGTGGACATCGAAATGAAAGCATGGTGGTTAAAGGAGTTGTATGCAAAAAGAACGTGGCTCATCGGCGAATGACATCAAAAATTGAAAAACCACGTTTTTTAATACTTGGAGGTGCTTTGGAGTATCAGCGCGTTTCTAACCAGTTATCAAGTGTGGATACTTTGTTACAGCAGGAGATGGACCATTTGAAGATGGCAGTTGCAAGGATTGATGCACATCACCCCAATGTGCTTTTAGTGGAGAAGTCAGTATCTCGCTATGCTCAAGAATACCTTCTTGCTAAAGACATATCCCTTGTCCTGAATATCAAAAAGCCACTTTTAGAGCGCATTGCTCGTTGTACTGGTGCACAGATTGTCCCTTCAATTGATCATTTGACCTCTCAGAAGCTGGGATATTGCGAAACATTCCACGTGGACAAATTTTTTGAGGAACATGGTAGTGCTGGGCAAGGTGGGAAAAAATCAACAAAGACTTTGATGTTCTTTGAGGGTTGCCCGAAACCTTTAGGTTGCACTATCTTGTTGAAGGGTGCCAATGGGGATGAGTTGAAGAAGGTGAAACATGTGATCCAATATGGAGTCTTTGCAGCTTATCATCTGGCCCTAGAGACATCTTTTCTGGCTGATGAAGGTGCTTCACCTCTAGAGTTTCCCTTGAAATCTCCCATAACTGTTGCGTTACCTGATAAACCATCTAGTATTGTGAGATCCATTTCCACTATCCCTGGATTTTCTGTTCTCTCTGCTAGAGAGTCTCAGGGAGCAAAACCTTGTGAAGTACCAAAATCTAATGATATCCACAAGACAGAAAGAACCCCATCTAGCTGCAGTGAGTCCACTGAAAGATCAATGGTGGGTGACTCAATCGATATGCACGGAGTGTCAGGAGATGCCATCCAATCAGCTCAGGATATGGCATCTTTGCACTGCAAAAGTTTCCTTTCAAATACTGCTTCTAAGGAGGACGATAATAAATGTCCTAAGGAATTTTTTCAATACAGACCAGATGAGAGAAGAGAAATTATGTTGAAAAATAATCTTATTTCAGATTCTTTTGGAACCTCTGAGTCTTCACAACAAGATGGCAATAGCCACCTCAAAGCTGCAGCATTGTCTGTTAATCAAGGCCCTAGTCCTGAGCCACCCTATGTAAGACATGATACTAATAGTAGTAATAACAATAATTATCATGAGGACATGATACATTCAAATGAAGATTTCCCCCCCTCAACTTCTGACCATCAGAGTATTTTAGTCTTTTTATCAACACGTTGTGTGTGGAAAGGATCTGTTTGTGAAAGGTCCCATCTTGTCAGAATTAAATACTATGGAAGTTCTGACAAGCCTTTGGGACGGTTCTTGAGAGATCAACTTCTTGATCAGAGTTACACCTGCTGCTCATGTGAATTGCCATCACAAGCCCATGTTCATTGTTATACTCATCGGCAAGGCAGCCTGACAATTTCTGTTATGAAACTACCAGATTTTGTTTTACCAGGGGAACGAGAAGGTAAAATTTGGATGTGGCACAGGTGCCTAAAATGTCCTCGTGTAAATGGTTTTCCTCCTGCTACACGAAGAGTAGTTATGTCTGATGCTGCCTGGGGCTTATCCTTTGGGAAATTTTTGGAGCTGAGTTTTTCAAATCATGCAGCAGCTAGCAGGGTTGCAAGTTGTGGTCATTCTCTCCACAGAGATTGTTTAAGATTCTATGGTTTTGGGAAGATGGTTGCCTGCTTTCGTTATGCTTCAATTCACCTTCATTCTGTTTATCTTCCCCCACCTAAACTAGAATTCATCAACTATGATAGGCAGGACTGGGTACAAAAAGAAGCTTATGAGCTGCATAAGAAGGCTGAATTACTGTTTAGTGAAGTGTGCACCGTTCTGCATCAAAATTCAGACAAGGTTTCAGGTACTGTGTTGCAGGAGGGTGGACATAGGGTGTCGGATTTTAGGAATCTAATTGCGGAACTTAAAGGGATGCTGCAGTATGAGAAAGAGGGAGTTGAGGACTCGTTACAAAAATTGCTGCATAAAGAAGGCAAAGCTGGACAGCCCATGATTGATATTTTAGAGCTCAATAAGTTGCGCAGGGATATCCTTATTCATTCTTATGTTTGGGACCAACGCTTGATATATGCATCCAATTTAATTAAAATTACACTTCAAGAAAATTCAAAGATCTTAAATCATAGAGAGAAGTTGCTTGGTCCAAGAGAGAAGATGGTTGAAGCAGATGTTGCCACTAGGCCAGCAAGAGGCCATAGCAGTTGTGATTCCTTTCTTTTGGAAACAAAACCTGATGGAAACCTAAATTTAGAAAACACTAGCCACCCTGGTGATGTGATTAAAAGTGAAGACAAGGGTAAAGATACAAATCATCATAAAGTTGACCTCTCTCTCTCTGGTTGTGTAAATACCAATGATAAATCTGATTCTGTGGAGTTTGGAGGGTCTGTAAGGAGGGCTTTGTCTGAGGGGGAATCTGCTGTTGTGGCTAATTTATCTGATACCCTTGATGCAGCATGGACAGGTGAAAGTCACCCTACAAATTCATCACTCAAAGAAAACGGTTGTCTATCTCCTGATGCAGCAGCTGTGGCTGTTCATTCACCTGTGGCAAATATAGTTACATCAAAATCAAATTCTGACAAGTATACTGCTGATATAGGTGGGATCGAGGCAGAATGTTCTAATTACTCTAAATTACTTTCCAAAGGACTTGATACTAAATGGAAAGCAATGCCTTTTGCAAACTTCTTTGGTTCATTCAATAAAACTTCTTCCTTCAATATTCAGAAACTTGTTGAGTACAACCCAGTCCACATTTTATCATTTCGAGAGGTGGAGCGCCAGACTGGTGCTAGACTACTTCTGCCCGCTGGCACTAATGATACTATAGTGCCTGTTTACGATGATGAACCCACTAGTGTTATAGCGTATGTGCTTGTGTCAATGGATTATCATATGCAGATGTCAGAATTTGATAGACCTAAAGACAGTGGAGACAGTTCAATTTCATTGCCACTCTTTGATTCAACAAGCTTACTTTCTCTTAACTCTTTCGATGAGACAATTAGTAATACATACAGAGGTCTTGGCTCTTTTGATGAGAGCATGTTATCCACTTCTGGGTCTCGGAGTTTACCGGCTGGGGATCCACTCTCATACACAAAGGATTTGCACGCAAGGGTTTCATTTACTGATGAGAGCTCCCTTGGGAAAGTGAAATATACTGTAACTTGCTACTATGCAAAGAGATTTGAGGCTTTAAGAAGAACTTGTTGCCCTACGGAGTTAGATTTTGTGCGGTCCCTTAGCCGTTGTAAGAAATGGGGGGCTCAGGGAGGAAAGAGCAATGTTTTCTTTGCAAAAACCCTGGACGATAGGTTTATTATCAAGCAGGTTACAAAAACAGAGCTAGAGTCATTTACCAAGTTTGCACCAGCTTATTTTAAGTATTTATCTGAGTCAATCAGTACAGGAAGCCCAACTTGTCTAGCAAAGATCTTGGGAATTTATCAGGTAACATCTAAGCACCTCAAAGGAGGGAAGGAAACAAAAATGGATGTTTTGGTTATGGAAAATCTTCTTTACAGGCGAAACATTAGACGGCTTTATGACCTCAAAGGTTCTTCCCGATCACGGTACAATCCAGATACAACTGGGAGCAATAAAGTGCTGCTGGATCAGAACCTCATTGAAGCTATGCCAACCTCTCCAATATTTGTTGGGAATAAGGCAAAACGGTTGCTGGAGAGGGCTGTGTGGAATGATACTGCCTTCCTTGCATCAATACATGTTATGGACTACTCATTGCTGGTTGGGGTGGATGAGGAAAAACATGAGCTGGTATTAGGTATCATTGATTTTATGAGGCAGTATACATGGGATAAACACCTTGAAACTTGGGTGAAGACCTCAGGCATCCTTGGTGGACCCAAGAATACTTCTCCAACAGTTATATCACCGCAGCAGTACAAGAAACGGTTTAGGAAAGCCATGAGTTTATATTTTCTCATGGTGCCAGATCAGTGGTCTCCTCCAGGGTTACACCCCAGTGGGTCCCAATCTGACATTTGTGACGAAAATGCATGA 5439 0.4218 MGTPDKKRSDFVDVVRSWIPRRAEPPNVSRDFWMPDQSCRVCYECDSQFTIFNRRHHCRLCGRVFCAKCTANSVPAPSYEPNTVREDWERIRVCNYCFKQWERLAAVDNNGSADPSSTPCLSPSPSTTSLVSTKSSCTCHSSSSTAGSVPYTTGPYQRVPYSPPQSSQMNQIADEQDNLNSGRSSNPSEAVGNLTSNQFGYCFNRSDDEDDDYGVYHSDTESRHYSHAHDYEDPVNIHGVDHVYGPHQMHTDEDNIQEKSLNCLTPPRNLDLEGVGGIQAPDKEADEHDHADGCETSPYHEENDAEPVDFESNGLMWLPPEPEDEEDDREAVLFDDDEDEGTTGGGEWGYLRSSTSFGSGECRSRDKASEDHRKAMKTVVEGHFRALVTQLLQVENLSICDEDGKENWLDIITALSWEAATILKPDMSRGGGMDPGGYVKVKCIACGHRNESMVVKGVVCKKNVAHRRMTSKIEKPRFLILGGALEYQRVSNQLSSVDTLLQQEMDHLKMAVARIDAHHPNVLLVEKSVSRYAQEYLLAKDISLVLNIKKPLLERIARCTGAQIVPSIDHLTSQKLGYCETFHVDKFFEEHGSAGQGGKKSTKTLMFFEGCPKPLGCTILLKGANGDELKKVKHVIQYGVFAAYHLALETSFLADEGASPLEFPLKSPITVALPDKPSSIVRSISTIPGFSVLSARESQGAKPCEVPKSNDIHKTERTPSSCSESTERSMVGDSIDMHGVSGDAIQSAQDMASLHCKSFLSNTASKEDDNKCPKEFFQYRPDERREIMLKNNLISDSFGTSESSQQDGNSHLKAAALSVNQGPSPEPPYVRHDTNSSNNNNYHEDMIHSNEDFPPSTSDHQSILVFLSTRCVWKGSVCERSHLVRIKYYGSSDKPLGRFLRDQLLDQSYTCCSCELPSQAHVHCYTHRQGSLTISVMKLPDFVLPGEREGKIWMWHRCLKCPRVNGFPPATRRVVMSDAAWGLSFGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGKMVACFRYASIHLHSVYLPPPKLEFINYDRQDWVQKEAYELHKKAELLFSEVCTVLHQNSDKVSGTVLQEGGHRVSDFRNLIAELKGMLQYEKEGVEDSLQKLLHKEGKAGQPMIDILELNKLRRDILIHSYVWDQRLIYASNLIKITLQENSKILNHREKLLGPREKMVEADVATRPARGHSSCDSFLLETKPDGNLNLENTSHPGDVIKSEDKGKDTNHHKVDLSLSGCVNTNDKSDSVEFGGSVRRALSEGESAVVANLSDTLDAAWTGESHPTNSSLKENGCLSPDAAAVAVHSPVANIVTSKSNSDKYTADIGGIEAECSNYSKLLSKGLDTKWKAMPFANFFGSFNKTSSFNIQKLVEYNPVHILSFREVERQTGARLLLPAGTNDTIVPVYDDEPTSVIAYVLVSMDYHMQMSEFDRPKDSGDSSISLPLFDSTSLLSLNSFDETISNTYRGLGSFDESMLSTSGSRSLPAGDPLSYTKDLHARVSFTDESSLGKVKYTVTCYYAKRFEALRRTCCPTELDFVRSLSRCKKWGAQGGKSNVFFAKTLDDRFIIKQVTKTELESFTKFAPAYFKYLSESISTGSPTCLAKILGIYQVTSKHLKGGKETKMDVLVMENLLYRRNIRRLYDLKGSSRSRYNPDTTGSNKVLLDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTAFLASIHVMDYSLLVGVDEEKHELVLGIIDFMRQYTWDKHLETWVKTSGILGGPKNTSPTVISPQQYKKRFRKAMSLYFLMVPDQWSPPGLHPSGSQSDICDENA 1812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02808 1812 Pfam FYVE zinc finger 33 101 IPR000306 GO:0046872
Spst3g02808 1812 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1461 1786 IPR002498 GO:0016307|GO:0046488
Spst3g02808 1812 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 1645 1787 - -
Spst3g02808 1812 MobiDBLite consensus disorder prediction 1215 1243 - -
Spst3g02808 1812 MobiDBLite consensus disorder prediction 336 370 - -
Spst3g02808 1812 FunFam 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B 1488 1643 - -
Spst3g02808 1812 FunFam 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B 24 109 - -
Spst3g02808 1812 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1 450 623 - -
Spst3g02808 1812 MobiDBLite consensus disorder prediction 1227 1243 - -
Spst3g02808 1812 SUPERFAMILY FYVE/PHD zinc finger 31 104 IPR011011 -
Spst3g02808 1812 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 25 115 IPR013083 -
Spst3g02808 1812 SUPERFAMILY GroEL apical domain-like 451 623 IPR027409 -
Spst3g02808 1812 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1492 1643 IPR027484 -
Spst3g02808 1812 MobiDBLite consensus disorder prediction 158 191 - -
Spst3g02808 1812 MobiDBLite consensus disorder prediction 138 152 - -
Spst3g02808 1812 CDD Fab1_TCP 385 657 - -
Spst3g02808 1812 MobiDBLite consensus disorder prediction 701 727 - -
Spst3g02808 1812 MobiDBLite consensus disorder prediction 138 191 - -
Spst3g02808 1812 Gene3D - 1645 1787 - -
Spst3g02808 1812 Gene3D GroEL 450 623 IPR027409 -
Spst3g02808 1812 MobiDBLite consensus disorder prediction 348 362 - -
Spst3g02808 1812 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1562 1728 IPR002498 GO:0016307|GO:0046488
Spst3g02808 1812 MobiDBLite consensus disorder prediction 707 721 - -
Spst3g02808 1812 MobiDBLite consensus disorder prediction 274 306 - -
Spst3g02808 1812 SMART fyve_4 28 103 IPR000306 GO:0046872
Spst3g02808 1812 MobiDBLite consensus disorder prediction 280 306 - -
Spst3g02808 1812 Pfam TCP-1/cpn60 chaperonin family 387 651 IPR002423 GO:0005524
Spst3g02808 1812 SUPERFAMILY SAICAR synthase-like 1521 1786 - -
Spst3g02808 1812 CDD PIPKc_PIKfyve 1523 1786 IPR044769 GO:0000285
Spst3g02808 1812 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 36 102 IPR017455 -
Spst3g02808 1812 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 22 1795 - -
Spst3g02808 1812 SMART PIPK_2 1496 1787 IPR002498 GO:0016307|GO:0046488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02808 Spst-Chr3 77653205 77662594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g02808 1 1812 EF-hand Containing Proteins AT3G14270 56.988 0.0 1927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02808 3 77653205 77662594 Spst3g02808 3 77653205 77662594 ECH
Spst3g02808 3 77653205 77662594 Spst3g02241 3 64813984 64820752 PCT