Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02356 ATGGGTAAGTTGCTGGAAGCATACTGGGGGGATCTTAAAAAGAATATGGATGAAGCACACAGCAGCCCTGGATTGCATGATGCAGCTGGACCTAGTCTTGCAGAAGAATGTGCGACTCTGAAGCTTTCCGTAAATGATGCTTGGGAATATCGACTGACACATCTGTATTGTGGACAGGGTGGATGCCGAACAGGGATGGCTAAAGTCACCAAGGCATATGACCTTCCTGCGAGGAAAATTATTCACACTGTTGGCCCAAAATATGCTATTAAGTACCATAATGCTGCAGAGAATGCTTTAAGTCATTGCTATCGTTCTTGCCTGGAGCTTCTGGTTGAAAATGGGCTTCAAAGCATTGCTATGGGTTGTATATATACGGAGGCAAAGAACTATCCCCGAGAACCAGCTGCACATGTAGCTATAAGTACATGTGAAGTTGGGAATGGAATTACTTTTGGCTTGAGTTTGAAATTTGAGTCTATGCTAGGCGAAACCATCTTTTATTCAGGAACTGTGCGACGATTTCTTGAGAAGCAGAAAAACACTGTAACAGCTGTTGTCTTTTGCACTGTGAGCACAACTGATACTGAAATATATAAAAGGTTGCTTCCACTGTACTTTCCTCGGGATAAACATGAGGAGCAGGTTGCTTTAACTAAACTTCCAGCTGATGTTGGGGATGAAAATGGTGAGACAATCATGGCTGAGCGTAAAATCAGAATAAAGCCTTTGCCCAAAAGGAGTGTTTCAAGACCACCTGAGTTTGCCATTGATCTTCCAGTTAGTGATGTTGGCTTGGTTAACAGGAATTCGTCACATTTAGATTCTTTTCTGGATCCTGCCTTTATGTCCATGATTAAAGACCCTGATCTAAGGCGTATGGAGCAGTGGGAGAAAACTGCTGAAGCACAAAGAGGCTGGAATTGTGCTAAATTGCTAGGATATGGCAACCTTGGTGGACCCACATTGTCTGCTGCTGAAGAATATTCTCTACACTCTAGATACCTGTCTAAAGCAAATTCTTTAAATCTTTCTGAAATTGCAGAAATGAAAATAGTCTATCGTGGAGGGGTAGACAGTGAGGGTCATCCTGTCATGGTTGTTGTAGGGGCTCACTTTTTACTCAGGTGTCTTGATCTGGAGCGATTTGTGCTCCATGTGGTAAAGGAGTTTGAGCCTTTAATACAGAAGCCTTTTTCTATTGTCTACTTCCACTCTGCTGCATCTTTGCAGATACAGCCAGACCTGGGTTGGATGAGAAGATTGCAACAAATACTAGGTCGGAAGCACCAGCGCAACCTGCATGCAATATATGTCCTTCACCCAACTTTCGGACTAAAAGCTGCTGTATTTGGGCTTCAGTTGTTTGTGGACAATGTGGTTTGGAAGAAAGTGGTATATGTTGATCGACTTCTGCAGCTCTTCAGATACGTACCTCGTGAACAGTTAACCATCCCAGATTTTGTGTTTCAGCATGATTTGGAGGTAAATGGAGGGACGGGTCTCATTGTGGATCCCAGAACAAAATATGTGTACAACAGACCGTGA 1548 0.4322 MGKLLEAYWGDLKKNMDEAHSSPGLHDAAGPSLAEECATLKLSVNDAWEYRLTHLYCGQGGCRTGMAKVTKAYDLPARKIIHTVGPKYAIKYHNAAENALSHCYRSCLELLVENGLQSIAMGCIYTEAKNYPREPAAHVAISTCEVGNGITFGLSLKFESMLGETIFYSGTVRRFLEKQKNTVTAVVFCTVSTTDTEIYKRLLPLYFPRDKHEEQVALTKLPADVGDENGETIMAERKIRIKPLPKRSVSRPPEFAIDLPVSDVGLVNRNSSHLDSFLDPAFMSMIKDPDLRRMEQWEKTAEAQRGWNCAKLLGYGNLGGPTLSAAEEYSLHSRYLSKANSLNLSEIAEMKIVYRGGVDSEGHPVMVVVGAHFLLRCLDLERFVLHVVKEFEPLIQKPFSIVYFHSAASLQIQPDLGWMRRLQQILGRKHQRNLHAIYVLHPTFGLKAAVFGLQLFVDNVVWKKVVYVDRLLQLFRYVPREQLTIPDFVFQHDLEVNGGTGLIVDPRTKYVYNRP 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02356 515 ProSiteProfiles Macro domain profile. 1 207 IPR002589 -
Spst3g02356 515 Pfam Divergent CRAL/TRIO domain 362 493 IPR001251 -
Spst3g02356 515 Pfam Macro domain 25 140 IPR002589 -
Spst3g02356 515 SMART sec14_4 346 492 IPR001251 -
Spst3g02356 515 SUPERFAMILY CRAL/TRIO domain 344 483 IPR036865 -
Spst3g02356 515 SUPERFAMILY Macro domain-like 171 235 IPR043472 -
Spst3g02356 515 CDD Macro_GDAP2-like 13 206 IPR035793 -
Spst3g02356 515 Gene3D - 345 496 IPR036865 -
Spst3g02356 515 CDD SEC14 350 486 IPR001251 -
Spst3g02356 515 Gene3D Leucine Aminopeptidase, subunit E, domain 1 13 212 IPR043472 -
Spst3g02356 515 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 24 255 - -
Spst3g02356 515 SUPERFAMILY Macro domain-like 25 144 IPR043472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02356 Spst-Chr3 67281516 67291517 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02356 3 67281516 67291517 Spst3g02356 3 67281516 67291517 ECH