Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g02307 ATGGAGAGTAGCGAGGAAGAAGATGACTTTCCTTCCATTGAGAGTATCATCCCCCAATCCAAGGTTGACTCTCTCTATCAGTCCCACACCGAAAAGGGGATTAGGAAGCTTTGCTGCGAGCTTCTAGATTTGAAGGATGCTGTGGAGAACTTGTGCGGCAATATGCACTCCAAGTTCTTGGCTTTCTTGAGGATATCTGAAGAGGCCGTGGAAGTAAAGCATGAATTGATCGAACTTCAAAAACATATCTCTGCACAAGGTATTCTTGTTCAGGATTTAATGACCGGTGTCTGCTGTGAATTAGAAGAGTGGAATCAGTCAAGCAATGATGTTACTGAAATTCAGCATGGGCCTGAACTGCCTGAAAATCTTGAACCATTACCAAATGATACAAATGACCAGAAAATGTTATTCTTGGAAAACATTGATGTACTTGTGGCTGAGCACAAGTTTGAAGAAGCATTGGAAGCATTAGATGCTGAGGAAAAAAATTATGCTGAGTTGAAAGGCTCAGGGAATAACCCTTCAGATGATGTTTCCTCATACAAGTCTGCTTTGTTGGAACGAAAGGCAATGCTTGAACATCAGTTAGTTGGAATTGCTGAACAACCTTCTATTAGTTTCCCTGAGCTGAAGACAGCCTTAAATGGTTTGATAAAACTTGGAAAAGGTTCTCAAGCACATCACTTAATGCTGAAATTTTATAAGTCTCACCTCCAGAAGAGAATTGAGGCTTTGCTTCCCTCAAGTTCTCTCTGTCCTGAAACATTTCCTTCTACATTATGTAAGATTGTGTTTTCTGTAATATCACTGACAATAAAGGAATCTGCTTTGATTTTTGGAGATAATCCTGTTTACACCAACAGAGTTGTTCAGTGGGCAGAGTGGGAAATTGAATATTTTGTACGAGTGGTGAAAGAGAATGCTCCCATATCTGAGACTGTTTCTGCCTTACGTGCTGCTTGCATCTGCATTCAGGCTAGTCTGAACTACTGCTCAATCTTGGAGTCACAAGGATTGAAAATGTCTAAATTACTGCTGGTACTTCTGCGTCCTTCTGTTGAAGAAGTTTTAGAATCAAATTTTAGACGTGCAAGAAGAGTAGTTCTTGACATGGAAGAATCTGCTGAATGTTGCCCATTGTCACCTAAGTTTGCATCTTCACTCTCTGCAATTGCAACTTCACTCTCTGCAATTGCAACTTCATCTAGTAGCATTCTTGTTGAGAGTGGAATGCGATTTATGCGCATAGTTGAAGAGATATTGGAACAGTTAACGCCATTGGCTTGTTTGCATTTCGGAGGAAATGTACTGAATAGAATCTTTCAACTATTTGATAAATACATGGATGCTCTCATCAGAGCACTACCAGGTCCTTCTGATGATGACAATCTTCCAGAATTGAAAGAGGCCGTGCTTTTCAGAGCCGAGACTGACTCTGAACAACTTGCAATATTGGGAATAGCATTTACGATATTGGATGAACTGTTACCAAATGCTGTGTTATCAAGGTGGATGCTGCAAAGTGAAGGCAAGGAACCAAATAGTGGATCATCAGAGAATATAACCTTCAATACAAATGCTAGTGCAGAATTAAAGGAGTGGAGGAAACATCTTCAACATTCTTTTGACAACAAACTTCGGGATCACTTCTGTCGGCAATATATTTTGACTTTCATCTACTCAAGAGAGGGAAAAACACGGTTGAATGCACATATTTACTTGGGTGATAACAGAGAGGATCTTTACTGGGATTCTGATCCACTGCCTTCGCTTCCATTTCAGGCATTGTTTGCAAGGCTGCAGCAATTAGCAATTGTGGCCGGAGATGTATTAATTGGGAAAGACAAAATACATAAAATTTTACTTGCTAGGTTAACAGAGACTGTTGTGATGTGGTTGTCCGATGATCAGGAGTTCTGGGGTGTGTTAGAGGATAGCTCAGCTCCTCTACAGCCACTTGGTTTGCAGCAGTTAATTCTTGATATGCACTTTACTGTTGAAATTGCACGCTATGCGGGGTATCCATCTCGCCACATTCACCAGATAGCATCAGCTATCACTGCTCGTGCCATCCGGACCTTCTCTGCTAGGGGCATAGACCCTCAAAGTGCACTTCCCGAGGATGAATGGTTTGTGGAAACTGCAAAGTCAGCAATACACAAGTTTCTGCTTGGGGCATCAGGGTCCGAGGCATCAGACACTGATGAAGATCATATCATTGTTCCTGATGAAGATGTCTCAGACTCTGATACTGTTTCATCCCTATCTTCGATGGACTCAACCGAGTCTTTTGCTTCTGCTAGCATGGCCGAACTTGACAGCCCCTCTAATTTGTTTGATTCAGATAATTGA 2355 0.4149 MESSEEEDDFPSIESIIPQSKVDSLYQSHTEKGIRKLCCELLDLKDAVENLCGNMHSKFLAFLRISEEAVEVKHELIELQKHISAQGILVQDLMTGVCCELEEWNQSSNDVTEIQHGPELPENLEPLPNDTNDQKMLFLENIDVLVAEHKFEEALEALDAEEKNYAELKGSGNNPSDDVSSYKSALLERKAMLEHQLVGIAEQPSISFPELKTALNGLIKLGKGSQAHHLMLKFYKSHLQKRIEALLPSSSLCPETFPSTLCKIVFSVISLTIKESALIFGDNPVYTNRVVQWAEWEIEYFVRVVKENAPISETVSALRAACICIQASLNYCSILESQGLKMSKLLLVLLRPSVEEVLESNFRRARRVVLDMEESAECCPLSPKFASSLSAIATSLSAIATSSSSILVESGMRFMRIVEEILEQLTPLACLHFGGNVLNRIFQLFDKYMDALIRALPGPSDDDNLPELKEAVLFRAETDSEQLAILGIAFTILDELLPNAVLSRWMLQSEGKEPNSGSSENITFNTNASAELKEWRKHLQHSFDNKLRDHFCRQYILTFIYSREGKTRLNAHIYLGDNREDLYWDSDPLPSLPFQALFARLQQLAIVAGDVLIGKDKIHKILLARLTETVVMWLSDDQEFWGVLEDSSAPLQPLGLQQLILDMHFTVEIARYAGYPSRHIHQIASAITARAIRTFSARGIDPQSALPEDEWFVETAKSAIHKFLLGASGSEASDTDEDHIIVPDEDVSDSDTVSSLSSMDSTESFASASMAELDSPSNLFDSDN 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g02307 784 Gene3D - 254 358 IPR042560 -
Spst3g02307 784 Pfam Exocyst component 84 C-terminal 139 341 IPR032403 -
Spst3g02307 784 Coils Coil 151 171 - -
Spst3g02307 784 MobiDBLite consensus disorder prediction 741 760 - -
Spst3g02307 784 PANTHER EXOCYST COMPLEX COMPONENT 8 4 767 IPR033961 GO:0000145|GO:0006887
Spst3g02307 784 MobiDBLite consensus disorder prediction 765 784 - -
Spst3g02307 784 Gene3D - 136 246 IPR042561 -
Spst3g02307 784 FunFam Os07g0568000 protein 253 357 - -
Spst3g02307 784 SUPERFAMILY Cullin repeat-like 138 358 IPR016159 -
Spst3g02307 784 FunFam Exocyst complex component EXO84C 138 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g02307 Spst-Chr3 66438321 66444203 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g02307 3 66438321 66444203 Spst3g02307 3 66438321 66444203 ECH